Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2318 ATGCGTGGATTGAAGACCGGATACCTTCTGTCACTAGCCTTCTTATGCGCCAAAATGGTTGAGACCATATCTCAGAGGCAATGGATTTTCGGTGCCCGGCAATTAGGCCTACGCCTTAGAGCTGCATTGATATCCCACATATATAAGAAGGGCTTGCATCTGTCAAGTAGATCGCGCCAAAGTCATACGGGTGGTGAGATAATGAACTATATGAGTGTGGATGTGCAGAGAATCACAGATTTCGTTTGGTATGTTAATGTGATATGGATGCTGCCTATACAAATTTCTTTAGCAGTCTTCATCTTGCAAACAAATCTTGGATTAGGTTCTATGGCTGCATTAGCTGCTACATTGGCAGTTATGACTTTGAACATCCCTCTTACAAAAGTACAGAAAAGATACCAAGCAAAGATCATGGAGGCTAAGGATGATAGGATGAAAGCAACTTCAGAAGTTCTCCGGAACATGAGGACCTTGAAACTTCAAGCATGGGATAGCCAATTTCTTGAAAGGATAGAAGCATTGAGGAAAAGAGAGTATAATTGGTTACTGAAGTCATTAAGACAAGGAGCACTTTCTGCTTTTATCTTCTGGGGATCACCTACATTCATTTCTGTGATAACCTTTTGGGCATGCATGTTCATGGGGATCGAGCTGACAGCCGCAAGGGTCTTATCCGCGTTTGCCACATTTAGAATGTTACAGGATCCTATATTTAGCCTGCCCGATTTACTCAATGTAATTGCTCAAGGAAAAGTTTCAGTTGATAGGATTGTTACTTTTCTTAGGGAGGAAGAAATCCAACATGATGTCATTGAATATGTTGCAAGGGACAAAACCGAATTCGATGTAGTTATTGATAAAGGGAGATTCAGCTGGGATCCTGAGTCAAGAACTCCAACCATTGATGAAATAGAGTTGAAAGTTAAGAGAGGAATGAAGTCTGGGACAGTCAAGATCAGTGGAACAAAAGCTTATGTTCCACAGTCACCATGGATACTGACAGGAAACATAAGGGATAATATTACCTTTGGAAAGGAGTACAATCATGAGAAGTATGAGAAAACCATTGAAGCATGTGCATTGAAAAAGGACTTTGAGCTATTCCCCTGTGGTGACCTCACGGAGATTGGTGAAAGAGGGATTAATATGAGTGGAGGACAGAAGCAAAGGATACAGATAGCTAGAGCAGTTTACCAGGATGCTGATATATATCTTCTTGATGACCCTTTCAGTGCTGTTGATGCTCATACTGGCACCCACCTCTTTAAGGAGTGCCTTATGGGGATTCTTAAAGAGAAAACTATACTTTTTGTCACACACCAAGTTGAGTTTCTTCCAGCAGCAGACCTTATTCTGGTGATGCAAAATGGAAAGATTGCACAAGCTGGAAAATTTGAAGAGCTCCTAAAGCAAAATATAGGATTTGAAGTTCTAGTTGGTGCTCATAGCAAAGCTCTAGAGTCAATCCTCACAGTGGAAAATTCAAGCAGAACAGCTCTAGATCCTATAGCTGAAGGGGAATCCAACACCATTTCCAACTCAAATGCTAAACTTGACAGCACACAGCATGACACAGTGCAAGATAATCCTCCAGAGAACAAGGGAAATGAAGGGAAATTGGTGCAAGAAGAAGAAAGAGAAACAGGAAGCATAGCAGGAGAAGTGTATTGGTCTTATTTGACCACTGTCAAAGGGGGAGCCTTGGTTCCAATCATACTATTGGCACAGTCTTCATACCAAGTACTTCAAATTGCCAGTAACTATTGGATGGCTTGGGTTTGTCCTACAAGTAGTGATGCTAAGCCTATATTTGAGATGAATTTCATACTACTTATTTATATGGTACTTTCTGTTGCTGGTGCATTTTGTGTCCTGGTGAGAGCCTTGTTGGTGGCAAATGCTGGACTTTGGACAGCACAGACATTTTTCACAAATATGTTGCACAGTGTGATCCGAGCTCCCATGTCATTTTTTGACTCAACCCCAACTGGAAGAATCTTGAATAGGGCCTCCACTGATCAAAGTGTTGTAGACTTGGAAATGGCAACCAAATTAGGATGGTGTGCTTTCTCAGTAATTCAAATTCTGGGCACTATTGCTGTGATGTCTCAGGTGGCATGGCAAGTATTTGCCATTTTCATTCCAGTAACTGCAGTCTGCATATGGTATCAACGATATTATACACCAACAGCAAGAGAACTGGCTCGCTTAGCACAGATACAAATTGCTCCAATTCTTCACCATTTTTCAGAATCTTTAGCAGGAGCAGCATCAATACGAGCTTTCGATCAAGAGGGCTGTTTCATTTACACAAATCTTGGTCTTGTGGATGGCCACTCGAGGCCATGGTTTCATAATGTGTCTGCAATGGAATGGCTTTCTTTCAGATTGAATTTGCTTTCAAATTTTGTTTTTGCCTTCTCACTGGTTTTGCTAGTCAGTCTCCCTGAAGGAATAATCAATCCAAGCATTGCGGGATTGGCAGTAACATACGGGATCAATCTGAATGTCTTGCAAGCTTCAGTTATATGGAACATATGCAATGCAGAAAACAAGATGATATCAGTTGAAAGAATTCTTCAGTACAGAAGTATAGCAAGTGAGGCACCTCTTGTGATTGAAGACTCCAGGCCACCAAGCAACTGGCCAGAAACTGGAACAATATCTTTCACAAATTTGCAGATACGTTATGCTGAACATCTGCCATCAGTTTTGAAAAACATCACTTGCACATTTCCTGGAAGGAAGAAAATTGGTGTTGTAGGGCGAACTGGTAGCGGAAAATCGACCCTTATACAGGCCATTTTCAGGATAGTTGAGCCCAGACAGGGAAGCATTATAATTGACAATGTGGACATTTGCAAGATAGGTCTCCATGACTTAAGGTCAAGGCTTAGCATCATCCCTCAAGACCCTGCCATGTTTGAAGGCACAGTTAGAGGAAACCTTGACCCCCTACAGCAATACTCTGACACTGAAGTGTGGGAGGCACTAGATAAATGCCAACTTGGTCATCTAGTGAGGGAAAAGGAAGGGAAGTTAGACAGTCCAGTGGTTGAAAATGGTGATAATTGGAGTGTGGGCCAAAGGCAACTATTCTGCCTTGGAAGAGCCCTGCTGAAGAGAAGCAGCATATTAGTACTTGATGAAGCAACAGCCTCCGTGGACTCTGCAACTGATGGAGTGATACAGCAGATCATCAGTCAAGAGTTCAAAGATCGTACTGTTGTCACAATTGCTCATCGAATCCACACGGTTATCGATAGCGATTTGGTTTTGGTGCTCAGTGATGGGAGAATTGCTGAGTATGATGAGCCATCAAAGTTACTTGAAAGAGAAGATTCCTTCTTCTATAAACTTATAAGGGAGTACTCTAGGAGATCACACAGCTTCAACAGCTTGGCAACTCAACATGTTCAAAGCAGGGAACACATCTAA 3441 0.4194 MRGLKTGYLLSLAFLCAKMVETISQRQWIFGARQLGLRLRAALISHIYKKGLHLSSRSRQSHTGGEIMNYMSVDVQRITDFVWYVNVIWMLPIQISLAVFILQTNLGLGSMAALAATLAVMTLNIPLTKVQKRYQAKIMEAKDDRMKATSEVLRNMRTLKLQAWDSQFLERIEALRKREYNWLLKSLRQGALSAFIFWGSPTFISVITFWACMFMGIELTAARVLSAFATFRMLQDPIFSLPDLLNVIAQGKVSVDRIVTFLREEEIQHDVIEYVARDKTEFDVVIDKGRFSWDPESRTPTIDEIELKVKRGMKSGTVKISGTKAYVPQSPWILTGNIRDNITFGKEYNHEKYEKTIEACALKKDFELFPCGDLTEIGERGINMSGGQKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTHLFKECLMGILKEKTILFVTHQVEFLPAADLILVMQNGKIAQAGKFEELLKQNIGFEVLVGAHSKALESILTVENSSRTALDPIAEGESNTISNSNAKLDSTQHDTVQDNPPENKGNEGKLVQEEERETGSIAGEVYWSYLTTVKGGALVPIILLAQSSYQVLQIASNYWMAWVCPTSSDAKPIFEMNFILLIYMVLSVAGAFCVLVRALLVANAGLWTAQTFFTNMLHSVIRAPMSFFDSTPTGRILNRASTDQSVVDLEMATKLGWCAFSVIQILGTIAVMSQVAWQVFAIFIPVTAVCIWYQRYYTPTARELARLAQIQIAPILHHFSESLAGAASIRAFDQEGCFIYTNLGLVDGHSRPWFHNVSAMEWLSFRLNLLSNFVFAFSLVLLVSLPEGIINPSIAGLAVTYGINLNVLQASVIWNICNAENKMISVERILQYRSIASEAPLVIEDSRPPSNWPETGTISFTNLQIRYAEHLPSVLKNITCTFPGRKKIGVVGRTGSGKSTLIQAIFRIVEPRQGSIIIDNVDICKIGLHDLRSRLSIIPQDPAMFEGTVRGNLDPLQQYSDTEVWEALDKCQLGHLVREKEGKLDSPVVENGDNWSVGQRQLFCLGRALLKRSSILVLDEATASVDSATDGVIQQIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDEPSKLLEREDSFFYKLIREYSRRSHSFNSLATQHVQSREHI* 1147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2318 1146 MobiDBLite consensus disorder prediction 502 533 - -
Dod06g2318 1146 CDD ABCC_MRP_domain2 887 1107 - -
Dod06g2318 1146 Pfam ABC transporter 906 1054 IPR003439 GO:0005524
Dod06g2318 1146 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 889 1123 IPR003439 GO:0005524
Dod06g2318 1146 PANTHER - 315 1134 - -
Dod06g2318 1146 PANTHER - 2 314 - -
Dod06g2318 1146 Gene3D - 872 1125 IPR027417 -
Dod06g2318 1146 CDD ABC_6TM_ABCC_D1 7 258 IPR044746 GO:0140359
Dod06g2318 1146 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 250 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod06g2318 1146 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 315 1134 - -
Dod06g2318 1146 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 2 314 - -
Dod06g2318 1146 ProSitePatterns ABC transporters family signature. 384 398 IPR017871 GO:0005524
Dod06g2318 1146 Pfam ABC transporter 301 411 IPR003439 GO:0005524
Dod06g2318 1146 Gene3D ABC transporter type 1, transmembrane domain 534 869 IPR036640 GO:0005524|GO:0016021
Dod06g2318 1146 MobiDBLite consensus disorder prediction 502 545 - -
Dod06g2318 1146 SUPERFAMILY ABC transporter transmembrane region 6 266 IPR036640 GO:0005524|GO:0016021
Dod06g2318 1146 CDD ABC_6TM_ABCC_D2 570 863 IPR044726 GO:0140359
Dod06g2318 1146 Pfam ABC transporter transmembrane region 576 816 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod06g2318 1146 Pfam ABC transporter transmembrane region 7 217 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod06g2318 1146 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 572 852 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod06g2318 1146 Coils Coil 131 151 - -
Dod06g2318 1146 CDD ABCC_MRP_domain1 284 459 - -
Dod06g2318 1146 SMART AAA_5 339 459 IPR003593 -
Dod06g2318 1146 SMART AAA_5 915 1107 IPR003593 -
Dod06g2318 1146 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 880 1120 IPR027417 -
Dod06g2318 1146 Gene3D - 267 497 IPR027417 -
Dod06g2318 1146 SUPERFAMILY ABC transporter transmembrane region 571 871 IPR036640 GO:0005524|GO:0016021
Dod06g2318 1146 Gene3D ABC transporter type 1, transmembrane domain 2 266 IPR036640 GO:0005524|GO:0016021
Dod06g2318 1146 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 279 475 IPR027417 -
Dod06g2318 1146 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 253 482 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2318 Dod-Chr6 51140315 51145859 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2318 290 503 Calmodulin-binding Proteins AT2G36910 29.545 1.17e-18 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2318 - - gmx:100817486 2016.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2318 06 51140315 51145859 Dod06g2318 06 51140315 51145859 ECH