Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2301 ATGTCCCTCATCACACGGAAAATTCCCTCCTCCCCACGGTTTCTAGAAATCACACGCATTTATCAAGCCCATACTTTCCTCTTATCGTCACTGGCTTTTGATAACCTTAAAGTGATCTCCGCCGTGGGGCGCGGCGCCAAGGGCGTCGTGTTCCTTGCTAGAACCGCTGATGACTGGTCATATCCGAAGGAGTGTTTGGCTCTGAAAGTGATCACAAAGGCTCTGATTCAGAGGAAGGAAGAGACTTACGGCGAGTACAAGAGAGTTTGGTTCGAACAGGAAGTGCTACGTCGTTTTGATCACCCTCTTTTGCCACGCTTGCTAGGGGTTATCGAAACAGAGAAAATCGTTGGGTTCGCTATGGATTACTGCCACGGAGGCAACCTCCATTCTCTCAGGAAGAGGCAGACTGAGAAAATGTTCTCCAAGTTTTACGCGGTGGAATTGGTCCTAGCATTGGAGTATTTGCATGAGTTAGGAATAGTGTACAGAGACTTGAAGCCAGAGAACGTGATGATCCAAGAAAACGGTCACATAATGCTCGTCGATTTTGATCTCTCGAAGAAGCTGAACCCGAAATCCCCTCAATCACTGAGTTACAACTCCTCGCCGAGTCCTAACTCGGTTTCGAAGAAACGGGTGAGGAAGCGACACTTGTCCGGGTTCTACAGTTACTGTCACTCGGGCATTTTCCCGTGCGAGTCAGACGCGGATCGACAACTCGGTGTTAACTCGGCGCCATCGTCTGACTCAGTGGAAAAATCGAACTCGTTCGTTGGAACGGAAGAGTACGTGGCACCCGAGGTCGTAATGGGAAAGGGTCACGATTTCAGTGTTGATTGGTGGTCACTCGGTGTCGTTTTGTACGAGATGTTGTACGGAACGACGCCGTTTAGGGGGGAGAATCGGAAGGAAACGTTTCACCGGATTTTAACGAAGGAGCCGGAGTTGACGGGGGAGAAGACGGCGTTAAGGGATTTGATTGGTAGGTTGCTGGAAAAGGACCCTGACCGTCGGATCAAACTTGGGGAAATCAAGGGCCACGATTTCTTCAGAGGGGTTAAGTGGGACACGGTGTTGCAAATTGCGAGGCCACCTTATATTCCTTCCAATGAGGTTGAGGACGCAGTGGGGTTTAGCAAAGATGACGTGGAGTTGTTTGTTGACGAAGTGTTTTTTCCAAAGTGCGATGATGAAGAAGAAGGGAAAAAGAGGGAAGTGGAGGAAAAGAATGGTGGTGGTGAGAATAACAATAAAGTGTGGTTTGACAAGTTGAGTACCAAACCCACTGAGAATGAGGATTTTTTAATTTTTTGA 1317 0.4844 MSLITRKIPSSPRFLEITRIYQAHTFLLSSLAFDNLKVISAVGRGAKGVVFLARTADDWSYPKECLALKVITKALIQRKEETYGEYKRVWFEQEVLRRFDHPLLPRLLGVIETEKIVGFAMDYCHGGNLHSLRKRQTEKMFSKFYAVELVLALEYLHELGIVYRDLKPENVMIQENGHIMLVDFDLSKKLNPKSPQSLSYNSSPSPNSVSKKRVRKRHLSGFYSYCHSGIFPCESDADRQLGVNSAPSSDSVEKSNSFVGTEEYVAPEVVMGKGHDFSVDWWSLGVVLYEMLYGTTPFRGENRKETFHRILTKEPELTGEKTALRDLIGRLLEKDPDRRIKLGEIKGHDFFRGVKWDTVLQIARPPYIPSNEVEDAVGFSKDDVELFVDEVFFPKCDDEEEGKKREVEEKNGGGENNNKVWFDKLSTKPTENEDFLIF* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2301 438 MobiDBLite consensus disorder prediction 193 209 - -
Dod06g2301 438 Gene3D Transferase(Phosphotransferase) domain 1 251 370 - -
Dod06g2301 438 SUPERFAMILY Protein kinase-like (PK-like) 22 372 IPR011009 -
Dod06g2301 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Dod06g2301 438 PANTHER SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN 29 412 - -
Dod06g2301 438 MobiDBLite consensus disorder prediction 193 212 - -
Dod06g2301 438 MobiDBLite consensus disorder prediction 399 438 - -
Dod06g2301 438 Pfam Protein kinase domain 253 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2301 438 Pfam Protein kinase domain 38 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2301 438 MobiDBLite consensus disorder prediction 399 413 - -
Dod06g2301 438 Gene3D Transferase(Phosphotransferase) domain 1 128 194 - -
Dod06g2301 438 Gene3D Phosphorylase Kinase; domain 1 35 127 - -
Dod06g2301 438 PANTHER FLIPPASE KINASE 1-RELATED 29 412 - -
Dod06g2301 438 ProSiteProfiles AGC-kinase C-terminal domain profile. 352 438 IPR000961 GO:0004674|GO:0005524|GO:0006468
Dod06g2301 438 ProSiteProfiles Protein kinase domain profile. 36 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2301 438 SMART serkin_6 36 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2301 Dod-Chr6 50457949 50460689 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2301 28 397 AGC Kinase Gene Family AT4G13000 59.626 2.79e-145 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dod06g2301 Pkinase 5.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2301 K20714 - gmx:100785773 558.14