Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2299 ATGGGGCCAAATGCGGGTCGTATGTCAGCGGCGGAAAAACAAGCGGAGCAGCTTAGAATGGACGGCAACGCTTACTTCAAGAAAGACCGTTTTGGAGCTGCCATCGATGCCTACACCGAGGCGATAACGCTGTGCCCCAATGTTCCTGTGTACTGGACGAATCGTGCTTTGTGCCATCTCAAACGCAATAATTGGGAGAGAGTAGAGGAAGATTGTCGGAGAGCAATTCAGCTAGACAGCAGTTCGGTTAAGGCCCACTATATGTTGGGACTTGCATTGCTACAGAAACAAGAACATACCAAGGGTATCAGAGAATTGGAAAAGGCTTTGGATCTTGGGAGAGGTGCCAATCCCAATGGCTATATGGTAGAAGAAATATGGCGGGAACTTGCAAAAGCAAAATATGTCGAGTGGGAACTATCATCTTCCAAGCGATCGTGGGACTTGCAGAGCTTGAAGGAAGCTTGTGAGTCTGCTCTAAAGGAAAAACATTTTCTTGATATGTCCCAAATGGAAGGATTTATAGATGATGCTACTACTTCCCATTCAGAACAACTGGAGGCTTTAGAAAGAGTCTTCAATAAAGCTGCAGAGGCTGACACGCCTAATGAGGTGCCAGATTATCTATGCTGTAGAATCACACTCGATATTTTTCACGATCCCGTAATCACTCCAAGTGGAATTACATATGAGAGGGCAGTAATTATTGACCATCTGCAGAAGGTGGGTAAATTTGACCCGGTCACGCGAGAACCGCTTGATCCATCACAGTTAATACCAAACTTAGCCATCAAGGAAGCAGTCCAGGCATTCTTGGACGAACATGGGTGGGCCTACAAGATAGATTAA 849 0.4582 MGPNAGRMSAAEKQAEQLRMDGNAYFKKDRFGAAIDAYTEAITLCPNVPVYWTNRALCHLKRNNWERVEEDCRRAIQLDSSSVKAHYMLGLALLQKQEHTKGIRELEKALDLGRGANPNGYMVEEIWRELAKAKYVEWELSSSKRSWDLQSLKEACESALKEKHFLDMSQMEGFIDDATTSHSEQLEALERVFNKAAEADTPNEVPDYLCCRITLDIFHDPVITPSGITYERAVIIDHLQKVGKFDPVTREPLDPSQLIPNLAIKEAVQAFLDEHGWAYKID* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2299 282 Gene3D Tetratricopeptide repeat domain 6 171 IPR011990 GO:0005515
Dod06g2299 282 SMART Ubox_2 208 271 IPR003613 GO:0004842|GO:0016567
Dod06g2299 282 SMART tpr_5 49 82 IPR019734 GO:0005515
Dod06g2299 282 SMART tpr_5 15 48 IPR019734 GO:0005515
Dod06g2299 282 SMART tpr_5 83 116 IPR019734 GO:0005515
Dod06g2299 282 Pfam Tetratricopeptide repeat 22 47 IPR019734 GO:0005515
Dod06g2299 282 SUPERFAMILY RING/U-box 199 279 - -
Dod06g2299 282 PANTHER OS08G0113300 PROTEIN 9 281 - -
Dod06g2299 282 SUPERFAMILY TPR-like 13 132 IPR011990 GO:0005515
Dod06g2299 282 ProSiteProfiles U-box domain profile. 204 278 IPR003613 GO:0004842|GO:0016567
Dod06g2299 282 Pfam U-box domain 205 277 IPR003613 GO:0004842|GO:0016567
Dod06g2299 282 ProSiteProfiles TPR repeat profile. 15 48 IPR019734 GO:0005515
Dod06g2299 282 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 203 281 IPR013083 -
Dod06g2299 282 CDD RING-Ubox_CHIP 205 271 IPR045202 -
Dod06g2299 282 Pfam Tetratricopeptide repeat 59 114 - -
Dod06g2299 282 PANTHER E3 UBIQUITIN-PROTEIN LIGASE CHIP 9 281 IPR045200 GO:0000209|GO:0061630
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2299 11 281 U-box Gene Family AT3G07370 69.742 4.40e-147 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2299 K09561 - gmx:100796519 508.834