Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2278 ATGTTGGCTTTCTGTTTTAGTAGGATGCCAAGAAGATATTTGGTTCTAATAGTTCTTATTAAGCTAAAACATTTGGTGGTTTTGTTTAGGTATGAGCTTGGTCGCCAGCCAGCTAACACCAAGCTATCAAGCAACAAGACAGTGAGGAGGATTCGTGTCAGAGGTGGCAATGTGAAATGGAGGGCATTGAGATTGGACACTGGAAATTATTCCTGGGGGAGTGAAGCTGTGACTCGCAAGACTCGTATACTTGATGTGGTCTACAATGCCTCAAACAATGAGCTTGTGCGTACTCAGACCCTTGTTAAGAGTGCTATTGTTCAGGTTGATGCTGCTCCATTCAAGCAGTGGTATCTTCAGCACTATGGTGTTGATATTGGTAGGAAGAAGAAAACAGCCACCAAGAAGGACACTGCAGAGGAGGGTGAAGCTGCTGCAGAAGAGACCAAGAAAAGTAACCATGTGCAGAGAAAACTGGAGAAACGCCAGAAAGACCGCAAGCTTGATCACCATATTGAAGAGCAGTTTGCTGGTGGGCGATTGCTCGCCTGCATTTCTTCTCGACCTGGTCAATGTGGCAGGGCTGATGGCTACATTCTCGGAAGGTAA 609 0.4581 MLAFCFSRMPRRYLVLIVLIKLKHLVVLFRYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTATKKDTAEEGEAAAEETKKSNHVQRKLEKRQKDRKLDHHIEEQFAGGRLLACISSRPGQCGRADGYILGR* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2278 202 CDD Ribosomal_S8e_like 30 200 - -
Dod06g2278 202 TIGRFAM eS8: ribosomal protein eS8 30 200 IPR001047 GO:0003735|GO:0005840|GO:0006412
Dod06g2278 202 PANTHER 40S RIBOSOMAL PROTEIN S8 30 200 IPR001047 GO:0003735|GO:0005840|GO:0006412
Dod06g2278 202 Pfam Ribosomal protein S8e 30 200 IPR022309 -
Dod06g2278 202 PANTHER 40S RIBOSOMAL PROTEIN S8 30 200 - -
Dod06g2278 202 MobiDBLite consensus disorder prediction 130 166 - -
Dod06g2278 202 Gene3D - 36 164 - -
Dod06g2278 202 Gene3D - 165 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2278 Dod-Chr6 49756335 49759321 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2278 30 200 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 84.302 1.86e-101 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2278 K02995 - gmx:100500112 305.449