Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2275 ATGCATGATCCGAAAATGGAAGCTAATGGAGTGGATTGTGATATTAAGATACCTTTGTTGCAGACTCAAGAAGACATCACGGATAGGACAGTTATGTTTCAAATAGGTGATATTAAGTGTGCATCATGCGTAAACTCTGTTGAGTCTGCAGTTAGGGACCTTAGTGGGGTAAACAGCATCGCGGTGTCACCACTTGATGGCCGAGCCGTAATCAAATATGTTCCCAAGTTCATCACTGCTAAAATTATAAAAGAAGCAATAGAAGACAGTGGCTTTAGAGTTGATGAGCTTCAGGAGCAAGACATATCAGTATGCCGTGTCAGGATTAAAGGGATGGCATGCACAAGCTGCTCTGAGTCAGTTGAGAATGCCCTTCAAATGGTTGATGGAGTGAAAAAGGCAACAGTAGGTCTAGCTATAGAGGAGGCAAAAGTATACTTTGATCCTAACCTCACAGATACTAACAAGATAATCAAAGCTATAGAAGATGCTGGTTTCAGCGCAGATCTTGTTAGCTCTGCAAATGATGTGAACAAAGTGCATCTAAAACTTGATGGGGTTGATTCTGCTGGAGATGTAAATATCATAATGTCTTCTCTTGAGTTAGCTGCAGGTGTGAATCATGTTGAAATGGATTTGCAAGAACATAAAGTTACAGTTAGCTATGATCCAGATATTACAGGTCCAAGATCTCTCATTCGCTGCATTGAGACAGCTAGCTGTGGCCCCAAGACGTATAGAGCATTCTTGTGCTCTGCTTCAGGAGAAAAAGAAAAAGATAAGGTGGATGAAATTCGTAGGTATAGGGACCAATTTTTGTTCAGCTGCTTATTTTCTGTTCCTGTGTTTCTATTTGCCATGGTGCTTCCCATGCTTCCTCCATATGGAAACTGGTTAAACTATAAGATCCACAATACGCTAACTCTTGGGTTGTTTTTAAGATGGATCCTTAGCACACCTGTGCAGTTCATAGTTGGCAAAAGGTTCTATGTAGGATCGTATCATGCATTGAGGCGAAGATCTGCTAACATGGATGTGCTGGTTGCGCTAGGCACTAATGCCGCTTACTTTTACTCAGTATATATTTTAATAAAAGCACTGACTTCAGATACATTTCAAGGACAAGATTTCTTTGAGACCAGTTCCATGTTGATATCCTTTATTCTATTAGGGAAATATTTGGAGAATTTGGCTAAAGGTAAAACATCAGATGCTTTGGGAAAGCTGACACAACTCGTTCCTGATAAAGCTTATTTGGTAGAAATTGATAGCGATGGAAATGTCATCTCGGAGACAGAAATTGAGACTCAACTTATACAAAAGAAAGACATAATTAAGATTGTTCCTGGGGCCAAAATTCCCGTTGATGGTGTTGTTATAAAAGGGCAAAGCTATGCAAATGAAAGTATGATCACTGGGGAGGCAAGACCTGTTTATAAAAGTCCTGGAGACAAGGTCATTGGTGGAACCATCAATGAGAACGGCTGCTTACTGATTAAGGCTACACATGTTGGATCAGAAACTGCACTTTCTCAAATTGTTCAGCTCGTAGAAGCTGCTCAACTTGCCAAAGCACCAGTTCAAAAACTTGCTGACGACATTTCAAGGGTTTTTGTTCCAATAGTGGTTGTTGCAGCACTCTTAACTTGGATGGGATGGTTTATTCCTGGGGAAGCTGGTTTGTACCCTAAAGGTTGGATACCAAAAGCAATGGATGCATTTGAGCTTGCTCTGCAGTTTGCTATTTCTGTACTAGTTGTTGCCTGCCCATGTGCTCTAGGTCTTGCAACCCCAACTGCAGTCATGGTTGCTTCAGGCATGGGTGCTTCTCAGGGTGTTCTCATCAAGGGTGGAGATGCACTGGAAAAGGCACACAAGGTGAAAATTGTTGTGTTTGATAAGACCGGGACACTAACAATTGGTAAGCCAGTGGTAGTTAGTGCAGTGTTGTTTTCTGAATTTTCCATGGAGGAGTTATGTGACATGGCAATTGCTGTTGAGTCAAGTAGTGAGCACCCATTAGCGAAAGCTGTTGTTGCACATGCTAAGAAGCTGCGCCAGAAATTTGGTGCCAGCACTGAGGAAGCACCAGATGTGAATGACTTTGAGGTGCACCTCGGAGCTGGTGTAAGTGGAAAAGTTGGTGATAGAACAATTTTAGTTGGAAACAAGAGACTTATGCATGCTTGTAATGTTCCATTATGTTCTGAGGTTAAGAGGTACATCTCTGAAAATGAAATTCTGGCTAGAACTTGTGTTTTAGTTTCAATTGATGGGAAGATTGCTGGAGCATTCTCTGTAACTGATCCACTAAAGCCAGAGGCTAAGCGTGTCATATCTTTTCTCCACTCCATGGGCATCTCAAGTATCATAGTGACTGGTGATAACTTTGCTACTGCAACTGCTATTGCAAATGAAGTCGGTATTGATGAGGTCTTTGCTGAGACGGATCCACTGGGCAAAGCTGATAAGGTGAAAGACTTGCAGATGAAAGGGATGACTGTGGCAATGGTGGGTGATGGAATAAATGACTCGCCGGCCTTGGCAGCTGCTGATGTTGGTATGGCAATAGGTGCTGGAACTGATGTAGCTATTGAAGCAGCTGATATAGTACTGGTCAAAAACAGTTTGGAAGATGTGATCACTGCCATAGATCTGTCTAGAAAGACCATGTCGCGTATCCGGCTCAACTACATCTGGGCTCTTGGTTATAACATTCTTGGCATGCCAATTGCTGCAGGGGTGTTGTACCCTTTTATTGGAATCAGATTGCCCCCATGGCTTGCTGGTGCTTGCATGGCTGCTTCTTCTCTTAGTGTGGTTTCTTCGTCTCTTTTGCTGCAGCTCTATAAAAAACCTTTGCACATAGAATCCACTTGA 2880 0.4233 MHDPKMEANGVDCDIKIPLLQTQEDITDRTVMFQIGDIKCASCVNSVESAVRDLSGVNSIAVSPLDGRAVIKYVPKFITAKIIKEAIEDSGFRVDELQEQDISVCRVRIKGMACTSCSESVENALQMVDGVKKATVGLAIEEAKVYFDPNLTDTNKIIKAIEDAGFSADLVSSANDVNKVHLKLDGVDSAGDVNIIMSSLELAAGVNHVEMDLQEHKVTVSYDPDITGPRSLIRCIETASCGPKTYRAFLCSASGEKEKDKVDEIRRYRDQFLFSCLFSVPVFLFAMVLPMLPPYGNWLNYKIHNTLTLGLFLRWILSTPVQFIVGKRFYVGSYHALRRRSANMDVLVALGTNAAYFYSVYILIKALTSDTFQGQDFFETSSMLISFILLGKYLENLAKGKTSDALGKLTQLVPDKAYLVEIDSDGNVISETEIETQLIQKKDIIKIVPGAKIPVDGVVIKGQSYANESMITGEARPVYKSPGDKVIGGTINENGCLLIKATHVGSETALSQIVQLVEAAQLAKAPVQKLADDISRVFVPIVVVAALLTWMGWFIPGEAGLYPKGWIPKAMDAFELALQFAISVLVVACPCALGLATPTAVMVASGMGASQGVLIKGGDALEKAHKVKIVVFDKTGTLTIGKPVVVSAVLFSEFSMEELCDMAIAVESSSEHPLAKAVVAHAKKLRQKFGASTEEAPDVNDFEVHLGAGVSGKVGDRTILVGNKRLMHACNVPLCSEVKRYISENEILARTCVLVSIDGKIAGAFSVTDPLKPEAKRVISFLHSMGISSIIVTGDNFATATAIANEVGIDEVFAETDPLGKADKVKDLQMKGMTVAMVGDGINDSPALAAADVGMAIGAGTDVAIEAADIVLVKNSLEDVITAIDLSRKTMSRIRLNYIWALGYNILGMPIAAGVLYPFIGIRLPPWLAGACMAASSLSVVSSSLLLQLYKKPLHIEST* 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2275 959 ProSitePatterns Heavy-metal-associated domain. 109 138 IPR017969 GO:0046872
Dod06g2275 959 Gene3D - 642 771 IPR023299 GO:0000166
Dod06g2275 959 SFLD C1.7: P-type atpase like 613 890 - -
Dod06g2275 959 SUPERFAMILY Calcium ATPase, transmembrane domain M 384 624 IPR023298 -
Dod06g2275 959 CDD P-type_ATPase_Cu-like 272 934 - -
Dod06g2275 959 PANTHER ATP7, ISOFORM B 15 956 - -
Dod06g2275 959 Pfam E1-E2 ATPase 416 609 - -
Dod06g2275 959 ProSiteProfiles Heavy-metal-associated domain profile. 30 96 IPR006121 GO:0046872
Dod06g2275 959 Gene3D - 399 521 - -
Dod06g2275 959 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 384 915 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod06g2275 959 SUPERFAMILY HMA, heavy metal-associated domain 100 172 IPR036163 GO:0046872
Dod06g2275 959 Pfam Heavy-metal-associated domain 33 92 IPR006121 GO:0046872
Dod06g2275 959 Pfam Heavy-metal-associated domain 106 166 IPR006121 GO:0046872
Dod06g2275 959 PRINTS P-type cation-transporting ATPase superfamily signature 467 481 - -
Dod06g2275 959 PRINTS P-type cation-transporting ATPase superfamily signature 861 873 - -
Dod06g2275 959 PRINTS P-type cation-transporting ATPase superfamily signature 763 774 - -
Dod06g2275 959 PRINTS P-type cation-transporting ATPase superfamily signature 631 645 - -
Dod06g2275 959 PRINTS P-type cation-transporting ATPase superfamily signature 785 795 - -
Dod06g2275 959 PRINTS P-type cation-transporting ATPase superfamily signature 838 857 - -
Dod06g2275 959 Gene3D - 178 244 - -
Dod06g2275 959 Pfam haloacid dehalogenase-like hydrolase 627 852 - -
Dod06g2275 959 TIGRFAM TIGR00003: copper ion binding protein 107 167 IPR006122 GO:0005507
Dod06g2275 959 TIGRFAM TIGR00003: copper ion binding protein 32 94 IPR006122 GO:0005507
Dod06g2275 959 ProSiteProfiles Heavy-metal-associated domain profile. 104 170 IPR006121 GO:0046872
Dod06g2275 959 CDD HMA 107 168 IPR006121 GO:0046872
Dod06g2275 959 PRINTS H+-transporting ATPase (proton pump) signature 869 894 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod06g2275 959 PRINTS H+-transporting ATPase (proton pump) signature 838 854 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod06g2275 959 SUPERFAMILY Calcium ATPase, transduction domain A 432 517 IPR008250 -
Dod06g2275 959 CDD HMA 182 237 IPR006121 GO:0046872
Dod06g2275 959 Gene3D - 97 177 - -
Dod06g2275 959 CDD HMA 32 94 IPR006121 GO:0046872
Dod06g2275 959 SUPERFAMILY HAD-like 629 944 IPR036412 -
Dod06g2275 959 SUPERFAMILY HMA, heavy metal-associated domain 173 242 IPR036163 GO:0046872
Dod06g2275 959 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 344 947 IPR027256 GO:0006812|GO:0016021|GO:0019829
Dod06g2275 959 ProSitePatterns E1-E2 ATPases phosphorylation site. 633 639 IPR018303 -
Dod06g2275 959 SUPERFAMILY HMA, heavy metal-associated domain 29 98 IPR036163 GO:0046872
Dod06g2275 959 Gene3D - 26 96 - -
Dod06g2275 959 SFLD p-type atpase 613 890 IPR044492 -
Dod06g2275 959 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 15 956 - -
Dod06g2275 959 ProSiteProfiles Heavy-metal-associated domain profile. 179 245 IPR006121 GO:0046872
Dod06g2275 959 Gene3D - 622 888 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2275 Dod-Chr6 49663044 49669717 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2275 24 953 Primary Pumps ATPases AT1G63440 56.624 0.0 1054
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2275 K17686 - gmx:100793894 1613.59