LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod06g2244	ATGGCCATGGGATTTAGATACATGGGGCCATTTGTGAGAGAAGGCTGGGAAAAAACGTTCTTCGTTGCAAAATTTTTCTGTTTTCTACATGTCATTGATGCCTACTTGGTTACCCCTGTTCAGACCTTTGGTCCCAGCATGCTTCCTGCAATAGATTTGGTTCCGAACGTGTTTTTGGCTGAAAGGATCTCAACCCAATTTGGTAAAGTTTCTCGCGGAGATATCATTGTTCTGCAGTCGCCTCAAAACCCTAGGAAGTTTATCACCAAACGCTTGGTTGGAATGGAGGGTGATAGTGTTACTTATGTTTCTAGCCCTGATGACAGTGATAAGCTTGAAACTGTTGTGGTTCCAAAGGGTCACGTTTGGGTACAGGGAGATAATGCTTATAATACCATTGATTCCAGAAATTTCGGTCCTGTTCCTTTTGGACTTATTGAGAGCAGGCTATTTTGGAGGGTATGGCCACTTAAATATTTTGGACCTTTTTGGAAACAGTGA	501	0.4251	MAMGFRYMGPFVREGWEKTFFVAKFFCFLHVIDAYLVTPVQTFGPSMLPAIDLVPNVFLAERISTQFGKVSRGDIIVLQSPQNPRKFITKRLVGMEGDSVTYVSSPDDSDKLETVVVPKGHVWVQGDNAYNTIDSRNFGPVPFGLIESRLFWRVWPLKYFGPFWKQ*	167

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod06g2244	166	PANTHER	PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED	10	165	-	-
	Dod06g2244	166	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	117	136	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Dod06g2244	166	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	35	51	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Dod06g2244	166	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	88	100	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Dod06g2244	166	CDD	S26_SPase_I	39	149	IPR019533	GO:0004252\|GO:0006465
	Dod06g2244	166	Gene3D	Umud Fragment, subunit A	31	165	-	-
	Dod06g2244	166	Pfam	Signal peptidase, peptidase S26	113	155	IPR019533	GO:0004252\|GO:0006465
	Dod06g2244	166	Pfam	Signal peptidase, peptidase S26	19	102	IPR019533	GO:0004252\|GO:0006465
	Dod06g2244	166	SUPERFAMILY	LexA/Signal peptidase	35	163	IPR036286	-
	Dod06g2244	166	PANTHER	PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN	10	165	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod06g2244	Dod-Chr6	48744585	48754541	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod06g2244	47	163	MADS-box Gene Family	AT1G29960	54.701	6.65e-44	139

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod06g2244	K09647		-	zju:107413489	209.534