Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2239 ATGGCTGTCCCTAAAGTGAATGAAAAGTTGCTTCAGGACCTTGAAGAAATGGGATTTCCACGGGCAAGAGCAACCCGAGCACTTTATTATTCAGGCAATACTAGCTTAGAGGATGCAATAAATTGGACAATTGATCATGAAAATGACCCTGATATTGATGAAATGCCATTGGTATATATAGACATTGATATTGAGTCTTCTGAATCATTCCCTATCACAGAAGAAATGAGAATCAAATCACGGAAGTTAAGGGAACAAGAGCTTAAGAGGAAAGAGGATGAAAGAGAAAAATTGGAGAGAGAAAGGGAGAAGGAAAGGATTCAAGTAGGTAAGAAACTTCTTGAGGCAAAGCGAATTGCTGAAGAGAATGAAAGACAACGGAATTTATCATTAAGAAAAGCAGAAAAGGAAGAAGAGAAAAGAGCAAGGGAAAGGGTTCTCCAGAGACTAAAACAAGATAAGATAAATAGAAGGTCAATACTTGGATTGCCTTCAGACGGCCAAGCTAATGCAAGATCATCAGCTATTGTGATACATCAAGAAAAGTTGCAGAATCCGAAGCCTGTTTACACAACTGCTGAAGTTGAGTACTTGAGAGAATGTCTGAGGTCTCTCAAGCGTAAACACCAGGGTGAGCATGGGAGAGTCAGAAAGGCCTTTGAAACGCTTCTAATTTATGTTGGAAATGTTGTAAAGAATCCAAACGAGGAGAAGTACAGGAAGATCCGACTGAGCAACCCATTATTCCAGGAAAGAGTTGGAAGTTTGAATGGAGGCGTAGAGTTTCTTGAGCTCTGTGGCTTTGAGAGAACCGGTGACTCCTTGTATCTGCCTCAAGAAAAGGTTGACATGGCAATGCTAAAATCAGCTGGTGACGTGTTAAATTCTGCTATGGCAAATCCTTTCTTTGGACTTTTCAGTACTCCACTTGGCTCATAA 939 0.4047 MAVPKVNEKLLQDLEEMGFPRARATRALYYSGNTSLEDAINWTIDHENDPDIDEMPLVYIDIDIESSESFPITEEMRIKSRKLREQELKRKEDEREKLEREREKERIQVGKKLLEAKRIAEENERQRNLSLRKAEKEEEKRARERVLQRLKQDKINRRSILGLPSDGQANARSSAIVIHQEKLQNPKPVYTTAEVEYLRECLRSLKRKHQGEHGRVRKAFETLLIYVGNVVKNPNEEKYRKIRLSNPLFQERVGSLNGGVEFLELCGFERTGDSLYLPQEKVDMAMLKSAGDVLNSAMANPFFGLFSTPLGS* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2239 312 Coils Coil 76 115 - -
Dod06g2239 312 PANTHER PUB DOMAIN-CONTAINING PROTEIN-RELATED 1 308 - -
Dod06g2239 312 PANTHER F13M7.16 PROTEIN 1 308 - -
Dod06g2239 312 CDD UBA_PUB_plant 6 53 - -
Dod06g2239 312 Gene3D - 199 297 - -
Dod06g2239 312 Pfam PUB domain 216 283 IPR018997 -
Dod06g2239 312 SUPERFAMILY UBA-like 5 57 IPR009060 GO:0005515
Dod06g2239 312 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 5 46 IPR015940 -
Dod06g2239 312 Gene3D - 8 53 - -
Dod06g2239 312 SUPERFAMILY PUG domain-like 196 302 IPR036339 -
Dod06g2239 312 Pfam UBA/TS-N domain 7 42 IPR015940 -
Dod06g2239 312 SMART PGNneu 218 279 - -
Dod06g2239 312 Coils Coil 119 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2239 Dod-Chr6 48536514 48563432 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2239 1 306 C2H2 Transcription Factor Family AT1G04850 54.839 3.06e-95 283