Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2230 ATGAATGACAACAAGCTTGATTGTTTAGGACGGATTCAACAAAGCCATGGACTCAATGGTGATTTGAATTCCGAGTTTGGAAACCGTTCTTGTCAATATTTTGATGTGAGAAAACAGGCTTGGAACATGGGAACTCCAAGTCATCCACTTGCCACGGCTTGTAGTGATGCTGGAGGAGGAGAACAACCACCATACATAGGCCCTTCCAAAACATCCAGCACCATTATCAGCCGTTCTGAGTCGCCGGCTTCTGCCTTTTATGCAACAGAAATCTTCACGGGTTTCCCACAAAATGATTGCCGAGTTAGTAACCCCTCTTTGATGTCCCAATTCTCCAAGAATAATGATTTGGAATTCCCTTTATATCAATCTTCTAAGGACCACCTTTTCTTGGACTCAGCTAACCAACCTAGCCCCAACTTTGAGTTGCCAAATACACTGCAAGCATTGAAATCACAATGGAATAGTGATCAATGCTGTAGAAGTCCTGAGAAATCTAATAAAATTATTCCATGTGGGAATTTCCCTGGCAGCAATTTCCTTCCAATTGAACAACATAAGTTGTTCATTGATGATGCTGCCCCAGTGAGCAGGAGCCCTTCAATTCCTCCTAAAGGAAGTCAGAATCATGCTGTTGCTTGTGGCTCCTACAATTTGCCTGTTGCACAGCTGAATTTCTCTTCTCAACAAGAGAAGCCGTCTCCAACACTTTCTGCAGGAAGTGTGTCAATGAATTCTCCAAACCATGCTTCTAATGGGCCGGTAGTCTCGAGTAAAACACGTATAAGATGGACTCAGGATCTTCATGAGAAGTTTGTTGAGTGTGTCAATCGCCTTGGTGGTGCTGAGAAGGCGACGCCGAAAGCTATACTAAGGCTAATGGAATCAGATGGACTGACAATCTTCCATGTTAAAAGTCATTTGCAGAAATATAGGATAGCAAAATACATGCCAGAGTCAAATCAGGGGAAATCTGACAAAAGAGCCCAAGTAGAGAATGTGCATCTTGATGTCAAAACTGGCTTGCAAATTAGAGAGGCACTTCAGCTGCAGTTAGATGTACAGAGGCGTCTTCATGAACAGCTAGAGGTTCAGAGAAAATTACAGCTGCGGATTGAGGAACAAGGTAAGCAGCTGAAGATGATGTTTGACCAGCAGCAGCAAAAAAGTACCTGCCTCTTTAATACCAAGAATTTGGGTAGTACGGATAATAATGAAAATATGTCTAAGGATGTTGAAATCACAATTTCTGAAGGGTCTGGAAATCCCTTCCAAGATAAGTTAGCCAACCACATAATTCCATAG 1305 0.4245 MNDNKLDCLGRIQQSHGLNGDLNSEFGNRSCQYFDVRKQAWNMGTPSHPLATACSDAGGGEQPPYIGPSKTSSTIISRSESPASAFYATEIFTGFPQNDCRVSNPSLMSQFSKNNDLEFPLYQSSKDHLFLDSANQPSPNFELPNTLQALKSQWNSDQCCRSPEKSNKIIPCGNFPGSNFLPIEQHKLFIDDAAPVSRSPSIPPKGSQNHAVACGSYNLPVAQLNFSSQQEKPSPTLSAGSVSMNSPNHASNGPVVSSKTRIRWTQDLHEKFVECVNRLGGAEKATPKAILRLMESDGLTIFHVKSHLQKYRIAKYMPESNQGKSDKRAQVENVHLDVKTGLQIREALQLQLDVQRRLHEQLEVQRKLQLRIEEQGKQLKMMFDQQQQKSTCLFNTKNLGSTDNNENMSKDVEITISEGSGNPFQDKLANHIIP* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2230 434 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 52 424 IPR044848 GO:0003700
Dod06g2230 434 Coils Coil 345 365 - -
Dod06g2230 434 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 259 314 IPR006447 GO:0003677
Dod06g2230 434 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 258 316 IPR017930 -
Dod06g2230 434 Pfam Myb-like DNA-binding domain 263 312 IPR001005 -
Dod06g2230 434 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 52 424 - -
Dod06g2230 434 MobiDBLite consensus disorder prediction 228 258 - -
Dod06g2230 434 Pfam MYB-CC type transfactor, LHEQLE motif 342 388 IPR025756 -
Dod06g2230 434 Gene3D - 258 317 - -
Dod06g2230 434 SUPERFAMILY Homeodomain-like 257 313 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2230 Dod-Chr6 48205368 48214187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2230 242 386 G2-like Transcription Factor Family AT4G28610 57.432 5.08e-49 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dod06g2230 Myb_DNA-binding 1.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2230 - - gmx:100780919 561.607