Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2216 ATGTTTTCGTGGTTGGCAAGGATAGTTTCGGCGTGCTTGAGGCCGGTGAGGCGATATGCCCGTATGAGCAAGGATGATGGGTTGGACAACGACAATTCGGCCGTTGAAGACGCCCTCTTGTGGTGCAGGGACCTCGAGAAGCACTCGTGTGGCGAATTCTCTTTCGCTGTGGTTCAGGCCAATGAGGTTATTGAGGATCACAGCCAGGTCGAGACCGGTTCCGATGCCGTTTTCGTTGGAGTTTACGATGGCCATGGTGGTCCCGAAGCTTCCCGCTTCATCAATGACCACCTCTTCCACCATCTCATCAGGATTGCTTGTGAAAATGGTTCTATCTCTGAAGATATAATCAGGGGTGCTGTTTCTGCTACTGAGGATGGGTTTCTGACTCTTGTTCGAAGGAGTTATGGAATAAAGCCATTGATAGCAGCAATGGGTTCCTGTTGTCTGGTTGGTGTCATCTGGAAAGGGATACTATATATTGCCAATCTTGGAGACTCACGTGCTGTAATCGGCTCTGTTAATGGATCTAACAAGATCATTGCTGAACAATTGACCAGAGAGCACAATGCTAGCAAAGAAGAGATTAGACGAGAGCTCAGGGCTTTGCATCCAGAAGATTCACAAATAGTAGTTATGAAGCATGGAACGTGGCGCATTAAAGGCATCATCCAGGTATCTAGATCTATTGGAGATGCATATTTGAAGCGGCCAGAGTTCTCCTTTGATCCTTCATTCCCGCGGTTCCACCTGCCCGAACCTATCCGCCGGCCTGTGCTAACAGCAGAACCGTCTGTGTGTTCAAGAGTTTTACAACCTAATGATAAGTTCCTTATTTTTGCATCTGATGGCCTTTGGGAACACATGACAAATCAGGAAGCTGCTGAGATTGTTCACAAAAACCCTCGATCTGGCATTGCAAGAAGACTTCTTAAGGCTGCTCTAAGTGAGGCAGCAAGAAAAAGGGAGATGAGATATAAAGATCTTCAAAAGGTTGAGAAGGGGATTAGGCGTTTTTTCCATGATGATATCACAGTGGTTGTTGTCTTCATTGACCATGAATTGCTTGGGAAGAACATTACAGTACCTGAGTTGTCCATCAAAGGGTTTGTCGATTCGGTTGGACCATCAAATTTTAGAAGCTTCCAGGATTTGGCATGA 1161 0.4625 MFSWLARIVSACLRPVRRYARMSKDDGLDNDNSAVEDALLWCRDLEKHSCGEFSFAVVQANEVIEDHSQVETGSDAVFVGVYDGHGGPEASRFINDHLFHHLIRIACENGSISEDIIRGAVSATEDGFLTLVRRSYGIKPLIAAMGSCCLVGVIWKGILYIANLGDSRAVIGSVNGSNKIIAEQLTREHNASKEEIRRELRALHPEDSQIVVMKHGTWRIKGIIQVSRSIGDAYLKRPEFSFDPSFPRFHLPEPIRRPVLTAEPSVCSRVLQPNDKFLIFASDGLWEHMTNQEAAEIVHKNPRSGIARRLLKAALSEAARKREMRYKDLQKVEKGIRRFFHDDITVVVVFIDHELLGKNITVPELSIKGFVDSVGPSNFRSFQDLA* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2216 386 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 6 371 - -
Dod06g2216 386 SUPERFAMILY PP2C-like 58 352 IPR036457 -
Dod06g2216 386 Pfam Protein phosphatase 2C 66 320 IPR001932 -
Dod06g2216 386 Gene3D - 32 359 IPR036457 -
Dod06g2216 386 Coils Coil 182 202 - -
Dod06g2216 386 SMART PP2C_4 32 349 IPR001932 -
Dod06g2216 386 PANTHER ALPHABET, ISOFORM E-RELATED 6 371 - -
Dod06g2216 386 ProSitePatterns PPM-type phosphatase domain signature. 78 86 IPR000222 GO:0043169
Dod06g2216 386 CDD PP2Cc 53 351 IPR001932 -
Dod06g2216 386 ProSiteProfiles PPM-type phosphatase domain profile. 52 351 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2216 Dod-Chr6 47681849 47687091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2216 1 382 PP2C-type Phosphatase Gene Family AT5G06750 70.588 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2216 K01102 - gmx:100778238 686.411