Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2213 ATGCACTTTTCTCAGCTAGTCAAACATCAATTCTTAGCAGTCATCATCATTATCATCGCCCTTGCAACCAAAGTTGGCTGCTTTCAATTCAATTTCCCCACCTTCCAACCACAAGATGAAGATCAATTATTGCTTAGCAAAAACTCAAAAATATACTTAGATGCCATCCAAGTAACCCCTGATATCCGTGGCCCAATAGGAAATTACTCTGGACGTGCTTTCTACTATAAACCATATAGAATCTGGAGCAAACAAAACAACCAAGTTGCATCCTTTACCACCACTTTTGTGCTCAACATCAATCCCGAAACCTACCCTAGTGGAGAAGGCTTGGCCTTCATCTTAACTGCAGATACCAATCTCCCAGAAAACAGTTCAGGGGAGTGGCTAGGAATTGTGAATGCTACAACTAATGGAACTTCTTCACAAGCTGCAGGGATTATTGCTGTGGAGTTTGACACAAGAAAAAGCTTCCCCGAAGATGGCCCTGACAACCATGTTGGCATCAACATAAACAGCATATACTCCATCAAACAGGTTCCATTAATCAACACTAGGGTCAATCTCTCATCAGGTATTAATGTAACTCTGAGAATTCAGTATGCCAATGATGTAATCTCAGTTTTTGGTTCCATGCCTGGAACTCCAGAAGAGTCAATGGAGACCCTTTTGGTATCTCCACCTCTTAACCTTTCTTCCTATCTCCAGGAAGAGGTTTATGTGGGTTTCTCGGCTTCGACAAGTAACTACACCCAGTTGAATTGTGTAAGAGCATGGGAATTCAACGGTGTAGACATTGTTCATGATAAGAACAATCTTTTGTGGGTTTGGATCACGGTTGCAGCAGTGAGTATTATTGTCATTGGTGGGGTGGTTTTTTTCATTCTTTGGCAAAGGAACTGCGGCAGGGAGAAACCAGAAGATGCGTATCCAAGGATAGAGGATCAGATTCAGCACTCCTCCATGGCTCCAAAGAAGTTTCGGTTAAGGGAAATCACAAGAGCAACAGGGGGATTCAGCCCTCAAAACAAGCTCGGTGAAGGCGGTTTCGGAACTGTCTACAAAGGCTTCCTTGGAAGCAAGGAGATAGCTGTGAAGAGAGTCTCCAAGAATTCGCGCCAAGGGAAGCAAGAGTTCATAGCAGAGGTGACAACAATTGGAAGCCTTCACCACAGAAACTTGGTGAAACTTATTGGTTGGTGCTATGAGAACCGAGAGCTTCTCCTTGTCTACGAGTTCATGCCTAATGGAAGTCTAGACAAGTACCTATTTGGTACTAAAACAATTGGTAACGGCTTTGAAGAAGGGTCCAATTCAACATTGAATTGGGAAACTAGGCATAGTGTGATATATGGTGTGGCTCAAGCACTTGACTATCTTCACAATGGCTGTGAGAAGATGGTCCTTCACAGGGACATCAAGGCCAGCAACATAATGCTGGACTTGGAATTCAATGCCAAGTTGGGGGACTTTGGATTGGCGCGTACCATTCAGAAGAGGAATGAAACTCACCACTCCACAAAAGAGATTGCAGGAACACCAGGTTACATGGCCCCAGAGACATTCCTCACTGGGAGGGCAACAGTGGAGACTGATGTGTATGCATTTGGTGTACTTGTGTTGGAGGTTGTGTGTGGGATGAGGCCAGGGAAAATGCATGCACAGGATGACTACAAGAACAGCATTGTGTATTGGGTGTGGGAGCTTTATGGGAAGGGGAAGATAGTTTCTGCTGTGGATTCAAGGATAAGCAAGGAGGAGGAGATCAAAGAGGAAGAGGTTGGTGGTGTTCTTGTTTTGGGGTTGGCTTGTTGCCATCCAAACCCACACAACAGGCCTTCCATGAGGACTGTTCTTCAGGTTCTCAATGGGGAAGCACCACCACCAGATGTACCAAAGGAAAGGCCTGCTTTTGTGTGGCCTGCCATGCCTCCATCATTCAAAGAAGAAGAGGATCGCTCCCTCATCAATGAATCACTCACTCCAATGTTAACTGAAGTCACCGCCAGATGA 2013 0.4496 MHFSQLVKHQFLAVIIIIIALATKVGCFQFNFPTFQPQDEDQLLLSKNSKIYLDAIQVTPDIRGPIGNYSGRAFYYKPYRIWSKQNNQVASFTTTFVLNINPETYPSGEGLAFILTADTNLPENSSGEWLGIVNATTNGTSSQAAGIIAVEFDTRKSFPEDGPDNHVGININSIYSIKQVPLINTRVNLSSGINVTLRIQYANDVISVFGSMPGTPEESMETLLVSPPLNLSSYLQEEVYVGFSASTSNYTQLNCVRAWEFNGVDIVHDKNNLLWVWITVAAVSIIVIGGVVFFILWQRNCGREKPEDAYPRIEDQIQHSSMAPKKFRLREITRATGGFSPQNKLGEGGFGTVYKGFLGSKEIAVKRVSKNSRQGKQEFIAEVTTIGSLHHRNLVKLIGWCYENRELLLVYEFMPNGSLDKYLFGTKTIGNGFEEGSNSTLNWETRHSVIYGVAQALDYLHNGCEKMVLHRDIKASNIMLDLEFNAKLGDFGLARTIQKRNETHHSTKEIAGTPGYMAPETFLTGRATVETDVYAFGVLVLEVVCGMRPGKMHAQDDYKNSIVYWVWELYGKGKIVSAVDSRISKEEEIKEEEVGGVLVLGLACCHPNPHNRPSMRTVLQVLNGEAPPPDVPKERPAFVWPAMPPSFKEEEDRSLINESLTPMLTEVTAR* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2213 670 Gene3D Phosphorylase Kinase; domain 1 324 413 - -
Dod06g2213 670 Gene3D - 27 273 - -
Dod06g2213 670 Gene3D Transferase(Phosphotransferase) domain 1 414 627 - -
Dod06g2213 670 CDD STKc_IRAK 345 624 - -
Dod06g2213 670 Pfam Protein kinase domain 342 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2213 670 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 9 657 - -
Dod06g2213 670 ProSiteProfiles Protein kinase domain profile. 339 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2213 670 ProSitePatterns Protein kinases ATP-binding region signature. 345 366 IPR017441 GO:0005524
Dod06g2213 670 SUPERFAMILY Protein kinase-like (PK-like) 320 622 IPR011009 -
Dod06g2213 670 Pfam Legume lectin domain 29 266 IPR001220 GO:0030246
Dod06g2213 670 CDD lectin_legume_LecRK_Arcelin_ConA 28 262 IPR001220 GO:0030246
Dod06g2213 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Dod06g2213 670 PANTHER - 9 657 - -
Dod06g2213 670 SMART serkin_6 339 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2213 670 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 262 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2213 Dod-Chr6 47556888 47559103 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2213 70 638 Receptor kinase-like Gene Family AT5G55830 38.614 1.59e-122 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dod06g2213 Pkinase 5.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2213 - - gmx:100785031 1025.39