Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2207 ATGACCATGGAACCAAACCCAACATCAGATCACATTCTGGACTGGCTTGAAGATTCTGTGTCTCTTTTCCCATCATTCTTGGATGATCCATATAACTCTAGTGACATCCAAGAGTATGAGTTGTGGGATCAAGGCCAAGACATAGGCCAGTACCAAACTGATGTCAATCTTGGATCTCTCAATGCCACCACCACAACCACCACCATCACTGCTGCTACTAGTGCCACCAGCACAACACCCCAAGACCCTGATCCTTATAACAACCAACCAATTTCTGGCTTGCCCAAGAAACGAAATGTCAGCGATGAATCTGGTCTAAAACCTTCACAAAGCACCAAATCCAAAAAATTAAAGAGCCATCCTACTAATGAAGCTGACAATGGATGTGCAGTTCTTGAAGGGACAAGTGTCAGAAAATCTGGTGGGAACAAGAGAGGTGGAGCTAAGGTCAATGGGAGTAACTGCAGCAATGGAAACAAGGATAGTAGGTGGGCAGAACAGTTGCTCAACCCTTGTGCTTTAGCCATCACTGGTCAAAACCTGAATCGTGTGCAACACCTCTTGTATGTTCTACATGAGCTAGCCTCACCTACTGGTGATGCCAACCACAGGCTTGCAGCGCATGGTCTCCGAGCACTAACACACCATCTATCATCATCGGCATCATCAGCAGCGTCTTCTGGGACTATGACTTTTGCTTCAACAGAGCCACGGTTCTTCCAAAAGTCACTGCTGAAGTTCTATGAGGTCAGCCCCTGGTTTTCTTTTCCCAATAACATAGCAAATGCTTCCATCCTTCAAGTCCTTGCTGAGGAACCAAATAGTACACGTACCCTTCACATCCTTGACATCGGGGTCTCTCATGGTGTGCAATGGCCGACGTTTCTAGAGGCCTTGAGTCGCAGACCTGGCGGACCTCCTCCGCTGGTCCGCCTCACGGTTGTTACTGCTTCCTCCACTGAAAATGAACAAAATATGGACACCCCTTTTGCAGTAGGTCCACCTGGTGATAACTTCTCCTCTAGACTGCTTGGTTTTGCTCAATCCATTAATGTCAATTTGCAGATAAACAGGCTTGATAATCATCCATTACAGACACTAAATGCTCAAAGTATTGACACCTCCCCAGATGAAACATTTATTGTCTGTGCACAGTTTAGGTTCCACCAGTTGAATCATAACACTCCTGATGAAAGAAGTGAGCTTCTGAAGGCTTTGAGGAACATGGAGCCTAAAGCGGTGATACTAAGTGAGAACAACATGGAATGTTGGTGCAACAATTGTGGGGATTTCGCCACCCGGTTCTCTCGAAGAGTGGAGTACATGTGGAGGTTTTTGGATTCAACAAGCTCAGCATTCAAGGGCCGTGAGAGTGATGAGAGGAGAGTGATGGAAGGGGAGGCTGCAAAAGCACTTACAAGCCAGTGTGAGATGAATGAAGGGAAAGAAAAATGGTATGAGAGAATGAAAGAAGCAGGGTTTGCAGAGGGAATATTGGGAGAGGATACAACAGATGGAGCTCGAGCTTTGTTGAGGAAGTATGACAGTAACTGGGAGATGAAAGCAGAAGAGGACAATAAGAGCGTGGGACTATGGTGGAAGGGGCAGCCTGTTTCTTTCTGCTCTTTGTGGAAGTTGGATGGGGACAAGCATGGTGGATCAAGCTCCACATTAACATCCCGGCTTTAG 1689 0.4654 MTMEPNPTSDHILDWLEDSVSLFPSFLDDPYNSSDIQEYELWDQGQDIGQYQTDVNLGSLNATTTTTTITAATSATSTTPQDPDPYNNQPISGLPKKRNVSDESGLKPSQSTKSKKLKSHPTNEADNGCAVLEGTSVRKSGGNKRGGAKVNGSNCSNGNKDSRWAEQLLNPCALAITGQNLNRVQHLLYVLHELASPTGDANHRLAAHGLRALTHHLSSSASSAASSGTMTFASTEPRFFQKSLLKFYEVSPWFSFPNNIANASILQVLAEEPNSTRTLHILDIGVSHGVQWPTFLEALSRRPGGPPPLVRLTVVTASSTENEQNMDTPFAVGPPGDNFSSRLLGFAQSINVNLQINRLDNHPLQTLNAQSIDTSPDETFIVCAQFRFHQLNHNTPDERSELLKALRNMEPKAVILSENNMECWCNNCGDFATRFSRRVEYMWRFLDSTSSAFKGRESDERRVMEGEAAKALTSQCEMNEGKEKWYERMKEAGFAEGILGEDTTDGARALLRKYDSNWEMKAEEDNKSVGLWWKGQPVSFCSLWKLDGDKHGGSSSTLTSRL* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2207 562 MobiDBLite consensus disorder prediction 72 157 - -
Dod06g2207 562 ProSiteProfiles GRAS family profile. 156 545 IPR005202 -
Dod06g2207 562 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 545 IPR005202 -
Dod06g2207 562 MobiDBLite consensus disorder prediction 72 95 - -
Dod06g2207 562 Pfam GRAS domain family 166 545 IPR005202 -
Dod06g2207 562 PANTHER NODULATION-SIGNALING PATHWAY 1 PROTEIN-LIKE 4 545 IPR030015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2207 Dod-Chr6 47343221 47346326 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2207 2 545 GRAS Transcription Factor Family AT3G13840 51.171 4.13e-179 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod06g2207 GRAS 4.9e-78 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2207 - - gmx:100806550 792.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2207 06 47343221 47346326 Dod06g2207 06 47343221 47346326 ECH
Dod06g2207 06 47343221 47346326 Dod10g1836 10 39813285 39814878 PCT