Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2204 ATGATGAGTGCAACTGCAACCGCAAGAAATAGGTCTCCTTTCACAGCAACTCAATGGCAAGAACTTGAACAACAAGCCCTTATTTTTAAATACATGGTTACTGGAGTACCTATTCCCCCAGATCTCATCTGCTCGATTAAAAGGAGTCTAGACTCTTCAATATCTTCAAGACTCTTCCCACATCATCCAATTGGGTGGGGATGTTTTGAAATGGGTTTTGGCAGAAAAGTAGACCCAGAGCCAGGGAGGTGCAGAAGAACAGATGGCAAGAAATGGAGGTGCTCAAAAGAAGCATATCCAGACTCAAAGTACTGTGAAAGACACATGCACAGAGGCAGGAACCGTTCAAGAAAGCCTGTGGAAGTCTCTTCAACAACGAGCAGCAGCAGCAGCAGCACAGCCACAAACACAAACACCTCCCACCAGGTGATCCCATCTTACGGCAACAGAAACCTTTCCATGGCCAACCCCAACATGCCTTCAGCATCTTCCTTCTCCTTTTCTCCATTACCTTCTTCCATAGCATCGGAGTCCCACCACCAGCCCTTTCCCCAATCCTACCAAAACACTTCTCTAAATCCCTTCTTTTACACACAATCAACATCTTCCAAACCCCATGATTCTGATTTTCCACCCCAAGATGCCACTACCCACCAGCTCTTCATGGATTCTGGTTCTTATTCTCAGGATGAAAAGGACTACAGGCATATTCATGGAATGAGGGAGGGTGTGGATGAAAGAGCTTTCTTCCCAGAAGCTTCAGGTTCTGCTAGGAGCTATCCTACTGACTCATATCAACAACTATCAATGAGCTCCTACAATAAGTCCTACTCAAACTCCCAATTCCAGAACATCAATGATAACAACCCAAGACAGCAACAAGAGCAACATTGCTTTGTTTTGGGCACTGACTTCAAATCAACCAGACCAAGCAAAGAGAAAGAAAGTGAGACAACACAGAGACCCCTTCACCACTTCTTTGGGGAGTGGCCACCAAAGAACACAGACTCCTGGCTTGATCTTGCTTCCAACTCTAGAATACCTTCAGGTGATGATGGTATTGCTTCATTCAATTTTTATTTTAATAATATTAAATTTCTTGTTTACCTATAA 1113 0.4403 MMSATATARNRSPFTATQWQELEQQALIFKYMVTGVPIPPDLICSIKRSLDSSISSRLFPHHPIGWGCFEMGFGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEVSSTTSSSSSSTATNTNTSHQVIPSYGNRNLSMANPNMPSASSFSFSPLPSSIASESHHQPFPQSYQNTSLNPFFYTQSTSSKPHDSDFPPQDATTHQLFMDSGSYSQDEKDYRHIHGMREGVDERAFFPEASGSARSYPTDSYQQLSMSSYNKSYSNSQFQNINDNNPRQQQEQHCFVLGTDFKSTRPSKEKESETTQRPLHHFFGEWPPKNTDSWLDLASNSRIPSGDDGIASFNFYFNNIKFLVYL* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2204 370 MobiDBLite consensus disorder prediction 119 218 - -
Dod06g2204 370 ProSiteProfiles QLQ domain profile. 13 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dod06g2204 370 ProSiteProfiles WRC domain profile. 78 122 IPR014977 -
Dod06g2204 370 MobiDBLite consensus disorder prediction 307 322 - -
Dod06g2204 370 PANTHER - 6 349 IPR031137 GO:0005634|GO:0006351|GO:0032502
Dod06g2204 370 PANTHER GROWTH-REGULATING FACTOR-LIKE PROTEIN 6 349 - -
Dod06g2204 370 Pfam QLQ 13 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dod06g2204 370 MobiDBLite consensus disorder prediction 307 326 - -
Dod06g2204 370 Pfam WRC 79 121 IPR014977 -
Dod06g2204 370 MobiDBLite consensus disorder prediction 105 218 - -
Dod06g2204 370 SMART QLQ_2 12 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2204 Dod-Chr6 47196350 47198756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2204 1 329 GRF Transcription Factor Family AT3G13960 41.176 4.70e-70 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Dod06g2204 WRC 2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2204 - - vun:114166369 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2204 06 47196350 47198756 Dod06g2204 06 47196350 47198756 ECH