Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2199 ATGGGAAGGAGTCCATGTTGCTCTAAGGAAGGCTTGAACAAAGGAGCGTGGACAGCTATGGAAGACCAGATTCTCACTGAGTACATTAAGATTCATGGTGAAGGAAAATGGAGACAGCTGCCCAAAAGAGCTGGTCTTAAGAGATGCGGGAAAAGTTGCAGGCTGAGATGGTTGAATTATCTAAGACCTGGCATTAAAAGAGGGAACATTACCAACGATGAAGAGGAGCTTATAATCCGGCTTCACAACCTTCTCGGAAACAGGTGGTCCTTGATTGCTGGGAGGCTTCCGGGACGAACAGACAATGAAATCAAGAACTACTGGAACACCAATATTGGAAGGAAACTTCAAAACGGTACCCCAAGCTGCTCCATCATCAGAAGTGGCGCAAGAAGCTCATCAAACTCAGTCCAACAGGATCCAAACCTGAAAAGCCGAGCCTGGAACTGTCCCTACCCACCAAATAAGGGCTCTTGTGTGGTCCAGACTAAAGCCACAAGGTGGCCTAAGGTCACACTCACCAAGGAAATTCCTAAACAAAATGAAGGCATTGACAACATCACCGTCGTCATTGATAACAACAAAATGAAGGGGTCATCGCCACTGTCGCCATCATCGGAGAGTAACAACAATATAGAACCGTTAGATTTCATGGCGGATTTTCAGATGGATAGCAGTCCCTTTTCGGAGCTCCTCAAGATGACTTTCCCGATGCATCATCATCACGTTTGGAAAATAAGATGTTGGAAGAAAGTGGTAATCGTTGCACTGTCGATGATGAGAAAGACCAGTTATTTCCAAAATCATCCAATGACACCCACTTCCCTTGGGTTGGTGATTCATTGTATGATATAG 855 0.4526 MGRSPCCSKEGLNKGAWTAMEDQILTEYIKIHGEGKWRQLPKRAGLKRCGKSCRLRWLNYLRPGIKRGNITNDEEELIIRLHNLLGNRWSLIAGRLPGRTDNEIKNYWNTNIGRKLQNGTPSCSIIRSGARSSSNSVQQDPNLKSRAWNCPYPPNKGSCVVQTKATRWPKVTLTKEIPKQNEGIDNITVVIDNNKMKGSSPLSPSSESNNNIEPLDFMADFQMDSSPFSELLKMTFPMHHHHVWKIRCWKKVVIVALSMMRKTSYFQNHPMTPTSLGLVIHCMI* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2199 284 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Dod06g2199 284 MobiDBLite consensus disorder prediction 127 145 - -
Dod06g2199 284 CDD SANT 16 61 IPR001005 -
Dod06g2199 284 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Dod06g2199 284 Gene3D - 14 66 - -
Dod06g2199 284 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 224 - -
Dod06g2199 284 MobiDBLite consensus disorder prediction 127 148 - -
Dod06g2199 284 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Dod06g2199 284 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Dod06g2199 284 CDD SANT 71 112 IPR001005 -
Dod06g2199 284 SMART sant 13 63 IPR001005 -
Dod06g2199 284 SMART sant 66 114 IPR001005 -
Dod06g2199 284 Gene3D - 70 144 - -
Dod06g2199 284 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Dod06g2199 284 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Dod06g2199 284 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Dod06g2199 284 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2199 Dod-Chr6 46861747 46864393 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2199 1 116 MYB Transcription Factor Family AT2G16720 76.724 5.80e-62 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod06g2199 Myb_DNA-binding 7.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2199 K09422 - gmx:100809225 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2399 05 50260166 50262035 Dod06g2199 06 46861747 46864393 ECH
Dod06g2199 06 46861747 46864393 Dod06g2199 06 46861747 46864393 ECH