Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2198 ATGGGTCGACGTCCGTGCTGCTCCAAAGAGATCAACAAAGGTGCTTGGTCACGAGAAGAAGATGAAACCCTCTCCAAATATGTCGCCATCAATGGTGAAGGCAAATGGCAGAAGGTTGCCCAAAATGCCGGTTTGAAGAGGTGCGGAAAGAGTTGCAGACAGAGATGGTTGAATTATCTCAAGCCTGGCATAAAGAGAGGTGACATCTCAGTGGATGAAGAGGATATGATCATAAGACTTCATCGTCTTCTTGGTAACAGATGGGCTTTGATAGCGAAGAGGCTACCGGGACGAACAGACAATGAAATCAAGAACTACTGGAATACCAATCTGTCAAAGAAGTTACAGAAACAGCCTGCATCATCATGGCCATCATTATCTGCCTCACCTAAACACAAGCACAATTACCATTACAAATGTGAAGAGGAGGAGAAGAGCAACCAAATCCATGTTGCTACCCGAAGCTCCTAG 471 0.4544 MGRRPCCSKEINKGAWSREEDETLSKYVAINGEGKWQKVAQNAGLKRCGKSCRQRWLNYLKPGIKRGDISVDEEDMIIRLHRLLGNRWALIAKRLPGRTDNEIKNYWNTNLSKKLQKQPASSWPSLSASPKHKHNYHYKCEEEEKSNQIHVATRSS* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2198 156 Gene3D - 69 150 - -
Dod06g2198 156 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 152 - -
Dod06g2198 156 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Dod06g2198 156 SMART sant 12 62 IPR001005 -
Dod06g2198 156 SMART sant 65 113 IPR001005 -
Dod06g2198 156 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 115 IPR017930 -
Dod06g2198 156 CDD SANT 15 60 IPR001005 -
Dod06g2198 156 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 64 IPR017930 -
Dod06g2198 156 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Dod06g2198 156 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Dod06g2198 156 CDD SANT 70 111 IPR001005 -
Dod06g2198 156 Gene3D - 6 66 - -
Dod06g2198 156 PANTHER MYB TRANSCRIPTION FACTOR 1 152 - -
Dod06g2198 156 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Dod06g2198 156 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2198 Dod-Chr6 46745352 46746959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2198 1 124 MYB Transcription Factor Family AT4G34990 58.594 5.40e-53 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod06g2198 Myb_DNA-binding 3.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2198 K09422 - gmx:100101858 251.136