Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2177 ATGTCAACCAATGTTATGTATTTTTTGTTTTCTTTGTTATACAGGAATGATGGTGAACTTGTTCAACAAATTGTCAAATTTTTGTTGATGAGGTTGAATGATATGCACCGAGTTACATCAAAAGGACTTGTTGGAATTGGCAAACCAATTGCACATTTAGAATTATTGTTGCGCAAAGAATCAAAAGATGTCCATGTTATTGGAATTTGGGGCTTGGGTGGTGTTGGTAAGACAACTATTGCTGAAGAAGTATACAACAGAATGTGTTCAGAATATGAAGGTTGTTGTTTTTTGGCCAACATAAGGGAAGAATCAACTAGACATGGAATAATTTCTTTGAAGAAGAAACTTTTTTCTACACTACTAGATGAACAAGATCTAAGAATTGACATACCAAATGGATTGCCCGGTTATGTTGAGAAAAGGCTTGGCCGAATGAAGGTTCTTATTGTTCTTGATGATGTTAATGATTCTGATCAACTAGATATTTTAATAGGAGCTCATGATAGGTTTGGACCAGGTAGTAGAATCATTGTAACAACTAGAGACAAGCAAGTGCTTGCTAAAGAAGTTGATGATATATATGAGGTTGAGGCATTAGACTTTGAGGAATCTCTTCAACTTTTCATTATGAATGCCTTTAAACAAAACCATATTTGTGACATGGAGTATTGTAAGTTGTCCAGGAGGGTGGTCTGTTATGCCAAAGGCATTCCATTGGTTCTTAAAGTTTTGGCTGGCCTTCTTCATGGAAAAGACAAGGATGTATGGGAAAGTCAATTAGAGAAATTGAAAAAGATGCCTAATAAAAAAGTTTATGATATAATGCGGCTGAGTTATGATGATCTTGATCGTGAAGAGCAGAATATATTTTTAGATATTGCTTGTATTTTTCATGGATTGAATCTGAAGTTGGACTACATAAAACTTTTATTGAAAGAAGATCATGATTACTCGGTGGCTGCAGGGATTGAGAGGTTAAAAGATAAAGCTCTTATAACTATTTCTGAACACCATATTGTATATATGCATGACATTATTCAAGAAATGGCTTTGGAGATCGCTCACGGGAACTCTATTGAATACCCCAAAAATCAACAGCGATTATTGGATCCCGATGACATTTATCAAGTGTTGGAAAACAAGAAGGGGAGTGACGCCATTAGAAGCATAGCCTTTAATCTTTCAGCAATTGAGGACCTTCAGTTAAGCCCTCATGTATTTGCTAAGATGAGAAAACTACAATACTTGTACTTTCACAGCAAAGTATCTAAAGAAGGCATGTATCATCCTCAAAATCAAGAGTCTTTTCCAAATAAAGGGCTGTATCTTCCTCAAGGACTTGAGTCTTTGCCTAATGAACTAAGATATCTTAGCTGGATGCATTACCCTCTGGAGTCCTTGCCAATGAACTTCTCTGCAGAAAACCTAGTTATATTGGATTTACCGTACAATCGAGTGGAAAAGCTTTGGGATGGAGTGCAGTCCCATCAGAAGGCTTTACTTTAA 1509 0.3612 MSTNVMYFLFSLLYRNDGELVQQIVKFLLMRLNDMHRVTSKGLVGIGKPIAHLELLLRKESKDVHVIGIWGLGGVGKTTIAEEVYNRMCSEYEGCCFLANIREESTRHGIISLKKKLFSTLLDEQDLRIDIPNGLPGYVEKRLGRMKVLIVLDDVNDSDQLDILIGAHDRFGPGSRIIVTTRDKQVLAKEVDDIYEVEALDFEESLQLFIMNAFKQNHICDMEYCKLSRRVVCYAKGIPLVLKVLAGLLHGKDKDVWESQLEKLKKMPNKKVYDIMRLSYDDLDREEQNIFLDIACIFHGLNLKLDYIKLLLKEDHDYSVAAGIERLKDKALITISEHHIVYMHDIIQEMALEIAHGNSIEYPKNQQRLLDPDDIYQVLENKKGSDAIRSIAFNLSAIEDLQLSPHVFAKMRKLQYLYFHSKVSKEGMYHPQNQESFPNKGLYLPQGLESLPNELRYLSWMHYPLESLPMNFSAENLVILDLPYNRVEKLWDGVQSHQKALL* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2177 502 PRINTS Disease resistance protein signature 66 81 - -
Dod06g2177 502 PRINTS Disease resistance protein signature 142 156 - -
Dod06g2177 502 PRINTS Disease resistance protein signature 235 249 - -
Dod06g2177 502 PRINTS Disease resistance protein signature 472 488 - -
Dod06g2177 502 SUPERFAMILY "Winged helix" DNA-binding domain 270 380 IPR036390 -
Dod06g2177 502 Pfam Leucine Rich Repeat 476 495 IPR011713 -
Dod06g2177 502 Pfam NB-ARC domain 54 281 IPR002182 GO:0043531
Dod06g2177 502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 294 IPR027417 -
Dod06g2177 502 Gene3D - 21 196 IPR027417 -
Dod06g2177 502 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 10 495 - -
Dod06g2177 502 SUPERFAMILY L domain-like 402 492 - -
Dod06g2177 502 Gene3D - 199 284 IPR042197 -
Dod06g2177 502 Gene3D Ribonuclease Inhibitor 358 499 IPR032675 -
Dod06g2177 502 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 495 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2177 Dod-Chr6 46075484 46078081 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2177 10 497 WRKY Transcription Factor Family AT4G12020 33.947 1.78e-74 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2177 - - adu:107464765 695.271