Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2175 ATGACGTCTTCTTCTGGAGCTTCACATATAAAATATGTTGCATTCGTCGGTCTCTTACTTATTTCAAATATTAGGGGCATGATGGCGAATACGATGTCATCAGACAATGCTTCTTCCTATCCGGTGGAAATTTTTACTGATGCTTCTTCTTCCTATCCAGTTGAAACTTTTGCCTTCACTGCTCCTCATATAAAATATGATGTCTTTGTTAGCTTCAGGGGCACCGACATCCGCCAAGGTTTCCTGAGCCATTTGATTAAGGCATTATCTCAAAAGCAAATTTTTGCCTTTGTAGATGATAAACTTGAGAGGGGAGATGAAATATCACAAGCACTTCTGAGAGCAATTGAAAGGTCACTGATTTCATTGGTCATATTTTCACCAGACTATGCTTCTTCGTCCTGGTGTTTGGAAGAACTTGTAAAAATAGCTGAGTGCAGGGAAAAAGATGGACAGACTGTAATACCCGTTTTCTATGAAATAGATCCATCAGAAGTACGACATCAAAAGGGAACTTTTGCAAATGCATTTTCTGAACATGAGAAAAAGTATGATAAGATCAAGGTGCAAATCTGGCGAAGTGCTTTGAGAGATTCTGCTAATTTGTCTGGATTTCATTCTTCAAACTTTAGGAATGATGGTGAACTTGTTCAACAAATTGTCAAATTTTTGTTGATGAGGTTGAATGATATGCACCGAGTTACATCAAAAGGACTTGTTGGAATTGGCAAACCAATTGCACATTTAGAATCATTGTTGCGCAAAGAATCAAAAGATGTCCATGTTATTGGAATCTGGGGCTTGGGTGGTGTTGGTAAGACAACTATTGCTGAAGAAGTATACAACAGAATGTGTTCAGAATATGAAGGTTGTTGTTTTTTGGCCAACATAAGGGAAGAATCAACTAGACATGGAATAATTTCTTTGAAGAAGAAACTTTTTTCTACACTACTAGATGAACAAGATCTAAGAATTGACATACCAAATGGATTGCCTGGTTATGTTGAGAGAAGGCTTGGCCGAATGAAGGTTCTTATTGTTCTTGATGATGTTAATGATTCTGATCAACTAGATATTTTAATAGGAGCTCATGATAGGTTTGGACCAGGTAGTAGAATCATTGTAACAACTAGAGACAAGCAAGTGCTTGCCAAAGAAGTTGATGATATATATGAGGTCGAGGCATTAGACTGTGACGAATCTCTTCAACTTTTCATTATGAATGCCTTTAAACAAAATCATAGTTGTGACATGGGGTATTGTAAGTTGTCCAGGAAGGTGGTCTGTTATGCCAAAGGCATTCCGTTGGTTCTTAAAGTTTTGGCTCGCCTTCTTTATGGAAAAGACAAGGACATATGGGAAAGTCAATTAGAGAAACTGAAAAAAATGCCTAGTAAAAAAGTATATGATATAATGCGGTTGAGTTATGATGATCTTGATCGTGAAGAGCAGAATATATTTCTAGATATTGCTTGTATTTTTCATGGATTCAATCTGAAGTTGGACTACATAAAACTTCTATTGAAAGACGATCATGATTACTCGGTGACTGCAGGGATTAAAAGGCTGAAAGATAAAGCTCTCGTAACTATTTCTGAAAACAATATTGTATCTATGCATGACATTATTCAAGAAATGGCTTTGGAGATCGTTCGCGGGGACTCTATTGAATACCCCAAAAACCAACAGCGATTATTGGATCCTGATGACATTTATCAAGTGTTGGAAAACAAGAAGGGGAGTGAGACCATTAGAAGCATAGCCTTTAATCTTTCAACAATAAAGGACCTTCAGTTAAGCCCTCATGTATTTGCTAAGATGAGAAAACTACAATATTTGTACTTTCACAGCAAAGTAACTGAAGAAGGCATGTATCATCCTCGAGATGAAGAGTCTTTTCCAAATAAAGGCTTGTATCTTCCTCAAGGACTTGAGTCTTTGCCTAATGAACTAAGATATCTTAGCTGGATGCATTATCCTCTGGAGTCTTTGCCAACCGACTTCTCTGCAGAAAAACTAGTTATATTGGATTTGCCGTACAACCGAGTGGAAAAGCTTTGGGATGGAGTGCAGGTAAATAGTATATACTAG 2091 0.373 MTSSSGASHIKYVAFVGLLLISNIRGMMANTMSSDNASSYPVEIFTDASSSYPVETFAFTAPHIKYDVFVSFRGTDIRQGFLSHLIKALSQKQIFAFVDDKLERGDEISQALLRAIERSLISLVIFSPDYASSSWCLEELVKIAECREKDGQTVIPVFYEIDPSEVRHQKGTFANAFSEHEKKYDKIKVQIWRSALRDSANLSGFHSSNFRNDGELVQQIVKFLLMRLNDMHRVTSKGLVGIGKPIAHLESLLRKESKDVHVIGIWGLGGVGKTTIAEEVYNRMCSEYEGCCFLANIREESTRHGIISLKKKLFSTLLDEQDLRIDIPNGLPGYVERRLGRMKVLIVLDDVNDSDQLDILIGAHDRFGPGSRIIVTTRDKQVLAKEVDDIYEVEALDCDESLQLFIMNAFKQNHSCDMGYCKLSRKVVCYAKGIPLVLKVLARLLYGKDKDIWESQLEKLKKMPSKKVYDIMRLSYDDLDREEQNIFLDIACIFHGFNLKLDYIKLLLKDDHDYSVTAGIKRLKDKALVTISENNIVSMHDIIQEMALEIVRGDSIEYPKNQQRLLDPDDIYQVLENKKGSETIRSIAFNLSTIKDLQLSPHVFAKMRKLQYLYFHSKVTEEGMYHPRDEESFPNKGLYLPQGLESLPNELRYLSWMHYPLESLPTDFSAEKLVILDLPYNRVEKLWDGVQVNSIY* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2175 696 Gene3D - 235 390 IPR027417 -
Dod06g2175 696 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 52 690 IPR044974 GO:0006952
Dod06g2175 696 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 229 490 IPR027417 -
Dod06g2175 696 ProSiteProfiles TIR domain profile. 64 228 IPR000157 GO:0007165
Dod06g2175 696 Pfam TIR domain 65 233 IPR000157 GO:0007165
Dod06g2175 696 SMART till_3 65 202 IPR000157 GO:0007165
Dod06g2175 696 Gene3D Ribonuclease Inhibitor 528 692 IPR032675 -
Dod06g2175 696 SUPERFAMILY Toll/Interleukin receptor TIR domain 62 205 IPR035897 -
Dod06g2175 696 Pfam Leucine Rich Repeat 672 691 IPR011713 -
Dod06g2175 696 PRINTS Disease resistance protein signature 262 277 - -
Dod06g2175 696 PRINTS Disease resistance protein signature 338 352 - -
Dod06g2175 696 PRINTS Disease resistance protein signature 431 445 - -
Dod06g2175 696 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 52 690 - -
Dod06g2175 696 Gene3D - 395 480 IPR042197 -
Dod06g2175 696 Pfam NB-ARC domain 250 477 IPR002182 GO:0043531
Dod06g2175 696 Gene3D - 63 234 IPR035897 -
Dod06g2175 696 SUPERFAMILY "Winged helix" DNA-binding domain 466 576 IPR036390 -
Dod06g2175 696 SUPERFAMILY L domain-like 539 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2175 Dod-Chr6 46060400 46064478 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2175 66 689 WRKY Transcription Factor Family AT4G12020 31.949 3.13e-85 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2175 - - ahf:112710439 956.436