Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2171 ATGGCGTCTTCTTCCCGAGCTGCTAATATAAAATATTTTGTATTCATTGGTCTCTTACTTATTTCAAAATTTAAGGGCATGGAGATGATGATGATGTCAAGCGACAAAGCTGCTCCTCAAATGAAATATGATGTCTTTGTTAGCTTTAGGGGCACAGATATTCGCCAAGGTTTCCTAAGCCATTTGATTACGGCATTCGATCAAAAGCAAATTTTAGCCTTCGTAGATGATAAACTTGAGAGAGGAGATGAAATATCACAAGCACTTCTTGAAGCAATTGAAAGGTCATTGATATCATTGATCATTTTCTCGCAAGACTATGCTTCTTCGTATTGGTGTTTGGAAGAACTTGTGAAAATAGTTGAGTGCAGAGACAAAATTGGACAAACTGTAATACCTGTTTTCTATGAAATAGATCCATCAGATGTACGACATCAAAAGGGAAATTTTGCAAATGCATTTGCTAAACATGAGAAAAAGTATGGTGAGATGAGGGTGCAAATCTGGAGAAATAGTTTGAAAGATTCTGCGAATTTGTCTGGATTTGATTCTTCGAACTTCAAGAGTGACGCTGAGCTTGTTCATGAAATTGTCAAATCAATGCTAGCGAAGTTGAATGATATTCACTTAGTTAAATCAAAAGGACTTGTTGGAATTGGCAAACCAATCGCATATTTAGAATCATTGTTGCGCAACAAATCAGAAGATATCCATGTTATTGGAATTTGGGGTTTGGGCGGTATTGGTAAGACAACCATTGCTGGAGAACTATACAACAGAATGCTTCCTGAATATGATAGTGGCTGTTTTTTGGCCAGCATAAGGGAAGAATCAAGTAGACATGGGATAAGTTTTTTGAAGAAGAAACTTTTTTCTGATCTACTAGATGAACAAGATCTAAGAATTAACATACCAAATGGATTGTCCAGTAATATTGAAAGAAGGCTTGGTCGTATGAAGGTTCTCATTGTTCTTGATGATGTTAATGATTCTAAACAACTAAAAATTTTAATAGGAGCTTGTGATTGGTTTGGATCAGGTAGTAGAATCATTGTAACAACTAGAGATAAGCAAGTGTTTGGTGGAGAAGTTGATGATATATATGAGGTTGAGCCACTGGACTATGCTGACTCCGTTCAGCTTTTCAATATGAACACCTTTTCTAAGCAAAACCATAATTTTGACGAGGAGCATTTTGAGCTGGTAAGGAAGGTGGTCAATTATGCCAAAGGCATTCCATTGGTTCTTGAAGTTTTAGCTGGCCTTCTCCGTGGAAAAGACAAGGAAATATGGGAAAGTCATTTAGAGAAACTAGAAAAGATGCCTCAGTAA 1332 0.3664 MASSSRAANIKYFVFIGLLLISKFKGMEMMMMSSDKAAPQMKYDVFVSFRGTDIRQGFLSHLITAFDQKQILAFVDDKLERGDEISQALLEAIERSLISLIIFSQDYASSYWCLEELVKIVECRDKIGQTVIPVFYEIDPSDVRHQKGNFANAFAKHEKKYGEMRVQIWRNSLKDSANLSGFDSSNFKSDAELVHEIVKSMLAKLNDIHLVKSKGLVGIGKPIAYLESLLRNKSEDIHVIGIWGLGGIGKTTIAGELYNRMLPEYDSGCFLASIREESSRHGISFLKKKLFSDLLDEQDLRINIPNGLSSNIERRLGRMKVLIVLDDVNDSKQLKILIGACDWFGSGSRIIVTTRDKQVFGGEVDDIYEVEPLDYADSVQLFNMNTFSKQNHNFDEEHFELVRKVVNYAKGIPLVLEVLAGLLRGKDKEIWESHLEKLEKMPQ* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2171 443 Gene3D - 40 210 IPR035897 -
Dod06g2171 443 Pfam TIR domain 42 210 IPR000157 GO:0007165
Dod06g2171 443 PRINTS Disease resistance protein signature 239 254 - -
Dod06g2171 443 PRINTS Disease resistance protein signature 409 423 - -
Dod06g2171 443 PRINTS Disease resistance protein signature 315 329 - -
Dod06g2171 443 ProSiteProfiles TIR domain profile. 41 205 IPR000157 GO:0007165
Dod06g2171 443 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 31 441 - -
Dod06g2171 443 Gene3D - 222 364 IPR027417 -
Dod06g2171 443 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 31 441 IPR044974 GO:0006952
Dod06g2171 443 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 207 441 IPR027417 -
Dod06g2171 443 SMART till_3 42 179 IPR000157 GO:0007165
Dod06g2171 443 Gene3D - 373 443 IPR042197 -
Dod06g2171 443 Pfam NB-ARC domain 227 440 IPR002182 GO:0043531
Dod06g2171 443 SUPERFAMILY Toll/Interleukin receptor TIR domain 32 182 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2171 Dod-Chr6 46027659 46030067 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2171 43 424 WRKY Transcription Factor Family AT4G12020 29.427 8.36e-43 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2171 - - ahf:112710439 590.112