Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2161 ATGTTGACTTGCATAGCATGTTCAAAGCAGCTCAATAATGGATCTCTTCACCAACAAGAAGAGGAAGAAGCTGTGCAAACACCAAGCACCAAGCAAGCCATCAAGGCTCTCACTGCTCAGATCAAGGACATGGCAGTGAAGGCTTCTGGGGCCTATAAGAATTGCAAGCCTTGTTCTGGATCTTCGAATGGTAACAGGAAAGGGAACTATGCTGACTCTGATGCGGGTTCAGATTCAGCAAGGTTTCACTGGGCCTACCGCAGAACAGGTAGCTCCAATTCGACCCCAAGGATGTGGGGGAAGGAAATGGAGGCCAGACTGAAAGGGCTTTCTAGTGGGGAAGGGACACCGGCTTCGGTGAGCGGACGCACTGAGTCAGTGGTGTTCATGGAGGAGGATGAGCCCAAGGAATGGATTGCACAAGTGGAGCCTGGTGTGCTAATTACCTTTGTTTCATTGCCTCAGGGTGGGAATGATCTGAAGCGGATACGGTTCAGTCGTGAAATGTTTAATAAATGGCAAGCTCAGAGGTGGTGGGCTGAAAATTATGACAAGGTCATGGAGTTGTACAATGTTCAAAGGTTCAATCAACAGGCAGTTCCTCTTCCGACCCCACCTATATCTGAAGATGAGAGTTCAAGGATTGAATCTGTCAGGGACAGCCCTGTGACTCCTCCTCTCAGCAAAGAGCCCCCACCCCGTCATTTTCACCACCCAACGGGACTGGGCTACTCGTCATCAGATTCCCTGGATCACAACCGAACCCAACGTCACCCTTGCTATGAAACAAGTGGTCTAGCCTCAACACCTAATCTTTCCAACATTAGTGGGTCAAAGACTGAAAGATCATCCATTGATGGTTCAGTCAAGACAAGTTCATCAAGAGATGGAGATCACTCGGGCGAGCTTTCAATCAGCAATGCCAGTGATATGGAAACTGAATGGGTTGAACAGGATGAACCAGGAGTATACATCACTATCAGAGCACTGCCTGGTGGAACCAGAGAACTTAGGCGTGTGCGGTTCAGCCGAGAAAGGTTTGGGGAAATGCATGCTAGATTGTGGTGGGAGGAGAACCGTGCCAGGATACAAGAACAATACTTGTGA 1107 0.4896 MLTCIACSKQLNNGSLHQQEEEEAVQTPSTKQAIKALTAQIKDMAVKASGAYKNCKPCSGSSNGNRKGNYADSDAGSDSARFHWAYRRTGSSNSTPRMWGKEMEARLKGLSSGEGTPASVSGRTESVVFMEEDEPKEWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNQQAVPLPTPPISEDESSRIESVRDSPVTPPLSKEPPPRHFHHPTGLGYSSSDSLDHNRTQRHPCYETSGLASTPNLSNISGSKTERSSIDGSVKTSSSRDGDHSGELSISNASDMETEWVEQDEPGVYITIRALPGGTRELRRVRFSRERFGEMHARLWWEENRARIQEQYL* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2161 368 MobiDBLite consensus disorder prediction 298 312 - -
Dod06g2161 368 MobiDBLite consensus disorder prediction 259 291 - -
Dod06g2161 368 ProSiteProfiles BRX domain profile. 313 368 IPR013591 -
Dod06g2161 368 PANTHER PROTEIN BREVIS RADIX-LIKE 3 1 368 - -
Dod06g2161 368 Pfam Transcription factor BRX N-terminal domain 22 58 IPR027988 -
Dod06g2161 368 ProSiteProfiles BRX domain profile. 136 191 IPR013591 -
Dod06g2161 368 MobiDBLite consensus disorder prediction 200 312 - -
Dod06g2161 368 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 368 IPR044532 -
Dod06g2161 368 Pfam Transcription factor regulating root and shoot growth via Pin3 312 367 IPR013591 -
Dod06g2161 368 Pfam Transcription factor regulating root and shoot growth via Pin3 136 190 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2161 Dod-Chr6 45585883 45591365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2161 1 368 Major Intrinsic Protein MIP AT1G31880 47.409 1.16e-101 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2161 - - gmx:100805480 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2161 06 45585883 45591365 Dod06g2161 06 45585883 45591365 ECH