Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2129 ATGGTCCTCTCGCAATCACCGTCGCAGAATGCGGCGGCAGAAGGAGGCTCCACTGTGATCTCTGTAAATGGTGGTCGGAATAGCCAATTTGCCGTCCAATGGGCAATGGAACACCTTTTGAAGAGGAACTCCTCCTGTGTCCTCATTCACGTTCGGACCCAAGGCTTGGATGCTCATGATGTTCTTCTTGTCCATAAACATGGTCGTCCACCAACTGAAGAAGAATTGCACAAATTTTTTCTCCCCTTCCGAGGATTGTGTGCTCGAAAAGGGATTGTAGCGAAAGAGTTGGTATTACATGATAGTGACGTGACAGGTGCACTTACTTACTATGTCAATGAAAACCATATCAGCAATGTCGTTGTTGGTGCTTGCCAATGGAATTCTCTGATAAGGAAACTTAAAAATGCAAATGTGCCAACAAACTTGGCGAAGTCTTTGCCACAATCTTGCATATTACACGTTATATCAAAAGGAAAAGTACAAAACATCCAGCCAACAGGTGCACCTCAGAATATTAAAGACTCAACAACAACAGCTATAAAAGACATAATCACTGTGCTACAAAAGTCTCCATTGGATCATCCACCTGAGGTTACTTCCCATGCCCCGCTTCATGTTTATGAAGATATAAAAAGTAAACCAGGCAAAAAGGGTATCAAACGGGAACCCAGTAGTAACGTTAAGGTGTATTTGCATGAACAAAAAGATGCCACATTATTGGTGACCTCACGACACAAGTCCGATGAAGACATCATCATTTCACCAAGAGGTCCAAGATTATCAGCAGCAGAAAGCACCTCATCACAGAATTCGTCAAATCAAAGTTCTCCCGACAACAATACGAGTAGTTTAGGGCTACTTGCTGATGAATTCACCGATATGTCACATGGAAACCAAGAAGTAGTTGTAAACTCAAACAATTGTAAGCACAATACTTCTTCAAAACCCAAAAAAAGATTGGATGCAGAAATAAGGAAACTAAGGCTCGATCTGAAGAAAACAGCAGCGAAACACAGAGCAATGGAGCTTGAAAAGCTCAGGCATCAAAAGGAACACGACATAGAGAAAGCTAAGCCAGTTGAAGAGGCTGAATTGGCTTCAGTAAAGCTGGAGAAGCAGAAAAACAAGGTGGCTGTGCAGCCAGCAGATAAGCCACAACGCATAATAGATAAGGAAACCCAAAAGGAAAAGCAAGCCGAAATAAAAGCGAGGAATAACAAAGAAGAAACGCAAAGAGCTTTAAATATTGCCATATATAAGAATGTTCCATACAGAAGATATGACATTAAAGACATTGAAGTCGCAACAAATTACTTCGATGATGCTCTAATGATTGGTGAAGGTGGATATGGACCAGTTTTTAGAGGAGTACTTGACCATACTGTTGTTGCCATTAAGGTCGTGCGGCCAGATTTAGCCCATGGGGAAAGACAATTCCAACAAGAGGTTCATGTTCTGAGCACCATAAGACATCCGAACATGGTTCTCCTTCTAGGTGCATGCCCCGAGTTTGGATGCCTTGTGTACGAATACATGGACAATGGCAGCTTGGAAGATCGTCTATTCCGAAAAGACAACACTCCACCAATCCCATGGACAACTCGTTTCAGCATAGCATCACAAGTTGCCACTGCCCTTCTTTTTCTCCACCAGACAAAGCCTGAGCCTCTGGTACACCGTGACCTCAAGCCAGCGAACATTCTATTGGACAGAAACTATGTGAGCAAAATCGGCGATGTGGGTTTAGCCAGGCTTGTTCCCCCTTCGGTGGCTGACAAAACCACCCAATATCGCCTTACAGCGGCTGCTGGAACAATATGCTATATTGACCCTGAGTATCAACAAACAGGGAAGTTGGGTGTTAAGTCAGACATATATTCATTTGGTGTGATGTTGCTGCAAATCATTACTGCAAGGCCCCCAATGGGATTGTCCCACTTGGTTGAGACGGCTATCGAGGATGGTTACTTCAAAGAGCTTCTTGATCCGAATGTGACTGATTGGCCCGTTGAAGAGGCCTTATCATGTGCCGAGTTGGCCTTGAAGTGCTGTGAGTTGAGGAAACGGGATAGGCCTGACCTTTCCACTGTCATTCTGCCAGAGTTGAACAGGCTTAAAGCTCTGGGAGCAAAAGCCAATGCCACTAACGGATCCTTCACATTGTTTTAA 2172 0.4388 MVLSQSPSQNAAAEGGSTVISVNGGRNSQFAVQWAMEHLLKRNSSCVLIHVRTQGLDAHDVLLVHKHGRPPTEEELHKFFLPFRGLCARKGIVAKELVLHDSDVTGALTYYVNENHISNVVVGACQWNSLIRKLKNANVPTNLAKSLPQSCILHVISKGKVQNIQPTGAPQNIKDSTTTAIKDIITVLQKSPLDHPPEVTSHAPLHVYEDIKSKPGKKGIKREPSSNVKVYLHEQKDATLLVTSRHKSDEDIIISPRGPRLSAAESTSSQNSSNQSSPDNNTSSLGLLADEFTDMSHGNQEVVVNSNNCKHNTSSKPKKRLDAEIRKLRLDLKKTAAKHRAMELEKLRHQKEHDIEKAKPVEEAELASVKLEKQKNKVAVQPADKPQRIIDKETQKEKQAEIKARNNKEETQRALNIAIYKNVPYRRYDIKDIEVATNYFDDALMIGEGGYGPVFRGVLDHTVVAIKVVRPDLAHGERQFQQEVHVLSTIRHPNMVLLLGACPEFGCLVYEYMDNGSLEDRLFRKDNTPPIPWTTRFSIASQVATALLFLHQTKPEPLVHRDLKPANILLDRNYVSKIGDVGLARLVPPSVADKTTQYRLTAAAGTICYIDPEYQQTGKLGVKSDIYSFGVMLLQIITARPPMGLSHLVETAIEDGYFKELLDPNVTDWPVEEALSCAELALKCCELRKRDRPDLSTVILPELNRLKALGAKANATNGSFTLF* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2129 723 Coils Coil 390 412 - -
Dod06g2129 723 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 19 134 - -
Dod06g2129 723 CDD STKc_IRAK 446 706 - -
Dod06g2129 723 SUPERFAMILY Protein kinase-like (PK-like) 420 699 IPR011009 -
Dod06g2129 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 558 570 IPR008271 GO:0004672|GO:0006468
Dod06g2129 723 CDD STK_N 17 159 - -
Dod06g2129 723 ProSiteProfiles Protein kinase domain profile. 440 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2129 723 Gene3D Transferase(Phosphotransferase) domain 1 513 717 - -
Dod06g2129 723 SMART serkin_6 440 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2129 723 Coils Coil 318 345 - -
Dod06g2129 723 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 17 715 - -
Dod06g2129 723 MobiDBLite consensus disorder prediction 242 286 - -
Dod06g2129 723 Gene3D Phosphorylase Kinase; domain 1 419 512 - -
Dod06g2129 723 PANTHER OS02G0152300 PROTEIN 17 715 - -
Dod06g2129 723 Gene3D HUPs 7 148 IPR014729 -
Dod06g2129 723 MobiDBLite consensus disorder prediction 261 286 - -
Dod06g2129 723 Pfam Protein tyrosine and serine/threonine kinase 445 698 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2129 Dod-Chr6 43759789 43767361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2129 18 723 Receptor kinase-like Gene Family AT1G17540 44.832 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Dod06g2129 PK_Tyr_Ser-Thr 4.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2129 - - gmx:100799611 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2129 06 43759789 43767361 Dod06g2129 06 43759789 43767361 ECH
Dod06g2129 06 43759789 43767361 Dod10g1864 10 40072746 40077029 PCT