Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2080 ATGGCCGTAGCTCCGGCAATCCTCCGGAGAACTCTCCTCTTCTTCTGCATCATAATTATCACAACCATTTTTCCAGTGACATATTGCATGTCAGAAGCTGAAGCTTTGTTGAGTCTCAAAAACTCATTTTCCAATGCTCAAGCTTTGGATAGTTGGGTGGCTAACTCTCTACCATGTACTGAAGGTGATCAATGGGAAGGTGTTGCCTGCTCCAATGGATTCGTCACGGGGCTTCGCCTTGGAGGAATGGGCTTATTAGGGGAAATAGATGTTGATGCATTGCTTGAACTCAAGGCTCTAAGAACTATTAGCCTTGCGAACAATTCTTTCTCAGGTCCCATCCCACAACTCAACAGAATAGGCTTCTTGAAAGCCATGTATTTGTCAGGGAATAAGTTTTCTGGGGATATTCCTCTAGATTACTTTCAGAGAATGAGGTCTCTCAAGAAAGTGTGGCTTTCCAACAACGAATTCACAGGTCGGATCCCGCCATCATTGGCCGAGATCCCTCAGCTTATTGAGTTACATTTAGAAGAAAACCAGTTTAGTGGAAGGATTCCAAATCTAGAGAACCCATCATTGGTGGACCTCAATTTGTCCAACAACAAATTGGAAGGTGAAGTTCCAGCTAGTTTACTAAAATTCAATGAGAGCTCTTTTTCAGGTAATTCCGGTCTTTGTGGTGAGAAGTTTGGCAAAACATGTGACAAGGCAATGGAGCGGACAATTCCCGCTGATGCACAAAATTCAGGAACGATGAGCAACAACGGTGGCAATGTTCCTGTGACAAATAGGAGTAGGAGTAAGTCGCTGCAGATAGCTGGCATTGTGGCCACAAGCTTAGTGCTTGTCTCACTCGTTGTTCTTTTCATTGTGAGATCGAGGCGGGAGAAGGATGAGAATTTTGATAGGCTCGGAAAAGACATTACAGAAGATGCAGTTGAAGTTCAGGTAACTGCACCAGTTAAAAGAGAAGCGGACACAATGAGAAAAACATCATCCAGCAGAAGGGGATCTGTACATGGTGGTGGTAAGGGAGTTGGCGAACTCGTTGTGGTGAATGATGAGAAGGGTGTTTTTGGGCTGCCGGATTTGATGAAGGCAGCTGCGGAAGTGCTGGGAAATGGGGGACTTGGATCTTCTTACAAGGCTGTGATGGCTAATGGAGTGGCAGTGGTAGTGAAAAGAACAAGGGAGACGAATGCATTAGGAAAAGAGGGTTTTGATGCTGAGATGAAGAAGCTTGGAAAGCTGAAACATTGGAATATCTTGACCCCTTTGGCTTACCATTATAGAAAGGATGAGAAATTAGTTATCTCTGAGTATGTTCCTAGGGGCAGTTTATTGTATTTACTACATGGTGACAGGGGACCATCTCACGCTGAACTAGATTGGCCTGCTCGTTTGAAGATTGTAAGAGGAATTGCTGAAGGAATGCGTTATCTTCATGCAGAGCTTGCTTCCTATAATGTGCCCCATGGCAATCTCAAGTCCAGCAATGTTCTCCTAGGACCAGATTCTGAGCCTCTTCTTGTAGACTTTGGGTTCAGCCATGTCGTTAACCCTTCCAGTGCACAAGCTCTATTTGCTTATAAGGCTCCTGAAGCAGCAAAAGGCCAAGTTTCTCGTACTTGTGATGTTTACTGTCTCGGGGTCGTCATACTCGAGATACTCACCGGAAAATTTCCTTCTCAATATCTTAACAATGGCAAAGGTGGAACAGATGTAGTGGAGTGGGTTACATCAACAATTTCTGAGGGAAGGGAATCAGAGCTTCTTGATCCTGAAATTGCAATCTTTAAGAATTCAATAGGTGAAATGGTGCAACTTCTCCATATTGGTGCTGCTTGCATTGAGAGCAACCCTCAGCAACGGATAGATATGGTTCAAGCCATTAGAAGGATAGAGGAGATAAAATCTGAGGATGGCCAAGAATCAAGAACAATAGAGGTTGTACCATCTCTCAGAGATGCCTATGCAGACTCTCATGCATTGCAAAATCAGGAACAAGGTGGACAATCTCGAAGGAGACATGGATCAGACAGCTCTGGAAGCCACGAATATTTTGAAATTGGTGGCTCTTAA 2085 0.4417 MAVAPAILRRTLLFFCIIIITTIFPVTYCMSEAEALLSLKNSFSNAQALDSWVANSLPCTEGDQWEGVACSNGFVTGLRLGGMGLLGEIDVDALLELKALRTISLANNSFSGPIPQLNRIGFLKAMYLSGNKFSGDIPLDYFQRMRSLKKVWLSNNEFTGRIPPSLAEIPQLIELHLEENQFSGRIPNLENPSLVDLNLSNNKLEGEVPASLLKFNESSFSGNSGLCGEKFGKTCDKAMERTIPADAQNSGTMSNNGGNVPVTNRSRSKSLQIAGIVATSLVLVSLVVLFIVRSRREKDENFDRLGKDITEDAVEVQVTAPVKREADTMRKTSSSRRGSVHGGGKGVGELVVVNDEKGVFGLPDLMKAAAEVLGNGGLGSSYKAVMANGVAVVVKRTRETNALGKEGFDAEMKKLGKLKHWNILTPLAYHYRKDEKLVISEYVPRGSLLYLLHGDRGPSHAELDWPARLKIVRGIAEGMRYLHAELASYNVPHGNLKSSNVLLGPDSEPLLVDFGFSHVVNPSSAQALFAYKAPEAAKGQVSRTCDVYCLGVVILEILTGKFPSQYLNNGKGGTDVVEWVTSTISEGRESELLDPEIAIFKNSIGEMVQLLHIGAACIESNPQQRIDMVQAIRRIEEIKSEDGQESRTIEVVPSLRDAYADSHALQNQEQGGQSRRRHGSDSSGSHEYFEIGGS* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2080 694 SUPERFAMILY Protein kinase-like (PK-like) 371 635 IPR011009 -
Dod06g2080 694 MobiDBLite consensus disorder prediction 660 694 - -
Dod06g2080 694 SUPERFAMILY L domain-like 30 215 - -
Dod06g2080 694 Gene3D Ribonuclease Inhibitor 119 237 IPR032675 -
Dod06g2080 694 Gene3D Phosphorylase Kinase; domain 1 352 442 - -
Dod06g2080 694 Pfam Protein kinase domain 371 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2080 694 Gene3D Ribonuclease Inhibitor 26 118 IPR032675 -
Dod06g2080 694 Gene3D Transferase(Phosphotransferase) domain 1 443 657 - -
Dod06g2080 694 Pfam Leucine rich repeat N-terminal domain 31 71 IPR013210 -
Dod06g2080 694 ProSiteProfiles Protein kinase domain profile. 367 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2080 694 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 6 644 - -
Dod06g2080 694 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2080 Dod-Chr6 39605330 39607646 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2080 12 638 Receptor kinase-like Gene Family AT3G42880 48.074 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod06g2080 Pkinase 3.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2080 - - lang:109337801 888.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2080 06 39605330 39607646 Dod06g2080 06 39605330 39607646 ECH