Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2077 ATGTCAACTTTCCCTGATACGGTGGCAGATTGCCGGAGGGCCGGCAAGGCACCTGAGAAATCCAATTTTTCTCAGGCTTGCAGCCTTTTGAGCCAGATTTTGAAGGAAAAGCGCAGTTCTGGTGCTTCTACCCTTGGAATGGGTGGGAAAATAGAGCCTAGAGCAAATACCAAGGACTTTTGCCCCAGCCTTCAAAATTCAGATGGGGCTTTGAGACTAAATGCTTCGGCCATGGATTCCCTTCCCCTGCTGGTGGAAAATCCCTGCATTAAGAAGTCTAATGTTAGGCGTTCAGGGTCTGAAACTCCCCAATTGACCATATTCTATGCTGGAAAAATGTTAGTATTTGACGCTTTTCCACCTGACAAGGCCACTGAGATCATGGAGTTAGCCACCAAGTTAGCCTCTGACAATTCCAGTGTTGAAGAAAGCCCCCCCAGTGGTCCGGTTGCTACAGAAAATTTGAATGTGGACAAAGCACCACAGACAAACACTGCCTCAGAAACCCCTCGCCCAGGAAACCAGGCTGTTGGTCCAGATATGAGGTATCCAAGGAGAGCTTCACTTCTAAAGTTCCTTGAGAAGAGAAAAGAAAGGGTCATTGCTAGAGGACCTTACCAAATAAACAACCCCAATGCCAGGCATGATGGAAGCAGTTCAGCAGGCGAACCAGAAGATCAGTGTTCCAAACGCTTTGACCTTAACTTATAG 711 0.474 MSTFPDTVADCRRAGKAPEKSNFSQACSLLSQILKEKRSSGASTLGMGGKIEPRANTKDFCPSLQNSDGALRLNASAMDSLPLLVENPCIKKSNVRRSGSETPQLTIFYAGKMLVFDAFPPDKATEIMELATKLASDNSSVEESPPSGPVATENLNVDKAPQTNTASETPRPGNQAVGPDMRYPRRASLLKFLEKRKERVIARGPYQINNPNARHDGSSSAGEPEDQCSKRFDLNL* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2077 236 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 8 230 - -
Dod06g2077 236 SMART tify_2 98 133 IPR010399 -
Dod06g2077 236 Pfam Jas motif 185 207 IPR018467 -
Dod06g2077 236 ProSiteProfiles Tify domain profile. 98 133 IPR010399 -
Dod06g2077 236 MobiDBLite consensus disorder prediction 135 185 - -
Dod06g2077 236 Pfam tify domain 101 131 IPR010399 -
Dod06g2077 236 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 8 230 IPR040390 -
Dod06g2077 236 MobiDBLite consensus disorder prediction 201 236 - -
Dod06g2077 236 MobiDBLite consensus disorder prediction 211 225 - -
Dod06g2077 236 MobiDBLite consensus disorder prediction 135 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2077 Dod-Chr6 39437295 39439619 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2077 15 199 Tify Gene Family AT1G72450 33.649 2.76e-20 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Dod06g2077 tify 4.8e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2077 K13464 - gmx:100778559 349.747