Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2057 ATGCCTTCGAAAAGGATTCTCTGGAAATCCTTCGCACTTGGCTGTTTCAAGGCCAAGCACCAATCCTTGGATCGAAAAGTAGTTTCTAAAAAGACATCTTCGAAGAGAATCTCCCTCTCTGATTTAAGCCATTCTTCATCACACTCTATCATGAGTGATTTATCAAATTCTCTTATAGGATCAAATATTCATATTTTCACATACCAGGAGCTGAAAGAGATTACACACAACTTCAGCAAAACCAATTTTCTTGGAGAAGGTGGGTTTGGGAAGGTATATAAAGGGTTTATCGATGACAAGCTTAAGCCTAGACTGGTACCTCAGGTTGTAGCAGTTAAGGCCTTGAACTTGGATGGGAAACAAGGCCACAGAGAGTGGTTGGCTGAAGTAATCTTTCTGGGGCAGTTGAAGCATCGCCATCTGGTTAACTTAATTGGCTATTGCTGTGAAGATGAGCACAGGCTTCTGGTCTATGAATACATGGAACGGGGCAATCTAGAAGAAAAGCTTTTCAAAGGTTATTTAGCAGCCCTGCCTTGGCTAACAAGAATCAAAGTAGCAATTGGGGCTGCAAAGGGACTTGCTTTCCTTCATGAAGAAGAGAAACCAGTCATATACAGAGATGTTAAAGCCTCAAACATTCTATTGGACGCTGATTACAATGCCAAGCTCTCGGATTTCGGTTTAGCAATAGATGGACCAGAAGAAGATGAATCACACGTCACAACTCGTGTGATGGGTACCCGTGGTTATGCTGCTCCTGAGTATATCATGACAGGCCATTTAACAACCACGAGCGATGTGTATAGCTTTGGAGTTGTTCTCCTAGAGCTACTCACAGGAAGGAAGACCGTGGACAAGAAACGACCCACCAGAGAGCAGGATTTGGTTGAGTGGGCAAGGCCTATGCTGAGGGATTCCCTTAAACTTGAAAGAATAATGGACCCAAGACTTGAGGGTCAGTACTCAACTGAAGGGGCAAGAAAGGTAGCAGCCCTGGCTTACCAATGTCTGAGCCATCACGCAAAGAACAGGCCCTCCATGCGGGCTGTGGTTAAGACCTTAGAGCCTCTCATGCTATTGACTGATATCCCAGTCGGTCATTTTGTCTATGTGGCTCCCAGTGAAGGAGACAATGAAGGCTCCCTCAAAGTGAATGAAAAAGGAGGAGAAAATGACCGTGATGAGATGAAGAAAAGTGGGAACAAAGCTGAAGATGCAAAGGGAGATAAAAAGGAGAAGGGCCACCACCGGCAACGAAAAAGTCGTAGCCGTAGAGGTCGGGTTAAGCCACTTAGGTCTCGTGCTGTTCACTCTGACACTGCTCTGTACAAGACTCTTGGTACTAGTTTATACTTTCCCAAACAAGAACCGGAAACAGACGGTGATGGACATGAGCCAAAATTAGCAATTTAG 1416 0.4477 MPSKRILWKSFALGCFKAKHQSLDRKVVSKKTSSKRISLSDLSHSSSHSIMSDLSNSLIGSNIHIFTYQELKEITHNFSKTNFLGEGGFGKVYKGFIDDKLKPRLVPQVVAVKALNLDGKQGHREWLAEVIFLGQLKHRHLVNLIGYCCEDEHRLLVYEYMERGNLEEKLFKGYLAALPWLTRIKVAIGAAKGLAFLHEEEKPVIYRDVKASNILLDADYNAKLSDFGLAIDGPEEDESHVTTRVMGTRGYAAPEYIMTGHLTTTSDVYSFGVVLLELLTGRKTVDKKRPTREQDLVEWARPMLRDSLKLERIMDPRLEGQYSTEGARKVAALAYQCLSHHAKNRPSMRAVVKTLEPLMLLTDIPVGHFVYVAPSEGDNEGSLKVNEKGGENDRDEMKKSGNKAEDAKGDKKEKGHHRQRKSRSRRGRVKPLRSRAVHSDTALYKTLGTSLYFPKQEPETDGDGHEPKLAI* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2057 471 Gene3D Phosphorylase Kinase; domain 1 40 160 - -
Dod06g2057 471 MobiDBLite consensus disorder prediction 414 432 - -
Dod06g2057 471 PANTHER BNAA02G16030D PROTEIN 26 413 - -
Dod06g2057 471 PANTHER OS01G0588500 PROTEIN-RELATED 26 413 - -
Dod06g2057 471 MobiDBLite consensus disorder prediction 381 413 - -
Dod06g2057 471 SMART serkin_6 78 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2057 471 CDD STKc_IRAK 84 358 - -
Dod06g2057 471 Gene3D Transferase(Phosphotransferase) domain 1 161 362 - -
Dod06g2057 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Dod06g2057 471 ProSitePatterns Protein kinases ATP-binding region signature. 84 113 IPR017441 GO:0005524
Dod06g2057 471 SUPERFAMILY Protein kinase-like (PK-like) 52 356 IPR011009 -
Dod06g2057 471 MobiDBLite consensus disorder prediction 375 471 - -
Dod06g2057 471 ProSiteProfiles Protein kinase domain profile. 78 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2057 471 Pfam Protein tyrosine and serine/threonine kinase 81 355 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2057 Dod-Chr6 36911574 36913980 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2057 59 394 Glycoside Hydrolase AT3G07070 47.214 6.78e-101 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dod06g2057 PK_Tyr_Ser-Thr 7.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2057 - - gmx:100790454 687.182