Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2040 ATGGTTTCACTAAAACTTCAGAAGCGGCTTGCTGCCAGCGTTCTCAAGTGCGGCAGGGGCAAGGTTTGGCTTGATCCTAATGAGGTTAACGAGATCTCCATGGCCAATTCCCGCCAAAACATAAGGAAATTGGTTAAGGATGGATTTATCATCCGGAAGCCAACCAAGATTCACTCCCGCTCACGTGCCCGGAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGATATGGTAAGCGTAAGGGTACTAGGGAGGCAAGGCTTCCCACCAAAGTCCTTTGGATGAGGAGGATGCGTGTCCTCAGGCGGTTGCTTCGTAAGTACAGAGAGTCAAAGAAGATTGACAAGCACATGTACCGTGATATGTACATGAAGGTAAAGGGTAATGTATTCAAGAACAAGAGAGTGCTAATGGAGAGCATACACAAGTCGAAGGCTGAGAAGGCAAGAGAAAAGACCTTGTCTGACCAGTTTGAGGCCAAGCGTGCCAAGAACAAGGCCAGCAGGGAGAGAAAAATTGCTCGAAGAGAAGAGCGCCTGGCCCAGGGTCCGGGAGAGAAGCCATCAGCTGCTCCGAGTGCTCCTTCTGCAGCAGCTTCACAGCTAGCACA 614 0.5065 MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLRKYRESKKIDKHMYRDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREERLAQGPGEKPSAAPSAPSAAASQLA 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2040 204 Gene3D - 57 188 - -
Dod06g2040 204 PANTHER RIBOSOMAL PROTEIN L19 1 202 - -
Dod06g2040 204 Hamap 50S ribosomal protein L19e [rpl19e]. 3 149 IPR000196 GO:0003735|GO:0005840|GO:0006412
Dod06g2040 204 Pfam Ribosomal protein L19e 4 145 IPR000196 GO:0003735|GO:0005840|GO:0006412
Dod06g2040 204 SMART Ribosomal_L19e_2 3 146 IPR000196 GO:0003735|GO:0005840|GO:0006412
Dod06g2040 204 ProSitePatterns Ribosomal protein L19e signature. 7 26 IPR023638 -
Dod06g2040 204 MobiDBLite consensus disorder prediction 57 79 - -
Dod06g2040 204 CDD Ribosomal_L19e_E 4 167 IPR033935 GO:0003735|GO:0022625
Dod06g2040 204 SUPERFAMILY Ribosomal protein L19 (L19e) 3 144 IPR035970 GO:0003735|GO:0005840|GO:0006412
Dod06g2040 204 MobiDBLite consensus disorder prediction 149 184 - -
Dod06g2040 204 MobiDBLite consensus disorder prediction 149 204 - -
Dod06g2040 204 Gene3D - 2 56 IPR015972 GO:0003735|GO:0005840|GO:0006412
Dod06g2040 204 MobiDBLite consensus disorder prediction 57 85 - -
Dod06g2040 204 PANTHER 60S RIBOSOMAL PROTEIN L19 1 202 IPR039547 GO:0003723|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2040 Dod-Chr6 34985492 34986989 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2040 1 199 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 84.729 1.25e-124 348