Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2039 ATGGACGACGAGGAGGAGATCCAGTCTCACCTGTCGCCGGCGAGCGGATCCCCGGCGTCGTCGCCGAGGGAGAACGGTCGGATAACGGTCACAGTGGCAGCGCCGGCGCCGCAGCAGCAACCACCGCCGCCGCCGAACAGCCTGGCATTAGCGCTCCCGATTCAGCAGCAGCCGAGAGGAAACGGCGGCGGCAGCGGTGGATGTGGAGGAGGAGGCGGAGGTGGGAGGGAGGATTGCTGGAGTGAGGGCGCGACGGCAGTGTTGATCGACGCGTGGGGAGAGAGGTATCTGGAGCTGAGCAGAGGGAACCTGAAGCAGAAGCACTGGAAGGAGGTGGCGGACATCGTGAGCGGTAGGGAGGACTATACCAAGGCACCCAAGACCGACATCCAGTGTAAGAACCGGATCGACACCGTCAAGAAGAAGTACAAGCTTGAGAAGTCCAAGATCGCCGCAGGCGGCGCTCCCAGCAAGTGGCCCTTCTACGATCGCCTAGACCAGCTGATCGGACCTACCGCCAAGATCCCCCCGGGGAACGCCGCCGCGCCGGCGCAGAAGGTTCCGCTAGGAATTCCGGTTGGGATCCGCGGTGCGAATCAGTACCAACCTCAAAAGAATCAGAGCCAGAGTCAGAGCAAGCAATTAAAGAACCAGAAGCTTACGTTCCGACGGCGTCCTCCTGCTCCTCCGGCTCCGGCAGAGTCCGATTCGTCGGAGCGAGACGCCGTGGCGTCGCCGGTGTCCAGCGAGAGCTTTCCGCCGGAGAGCTACGAGAAGAAGAGGCCGAGGCTGCAGCAGAGGGAGATGGAGATGAACTCGAATGCTATGAGGGGCAGGGGAGGGAAGGGGAAGCGTAAGGGCTGGGGGAGTGCGGTAAGGGAATTGACGCAGGCGATTCTCAAGTTCGGTGAGGCTTACGAGCAAGCGGAGAGCTCGAAGCTGCAGCAGGTGGTGGAGATGGAGAAACAGAGGATGAAGTTCGCCAAGGACCTTGAGTTGCAGAGGATGCAGTTCTTCATGAAGACGCAGTTGGAGATATCGCAGCTCAAGCTTGGAAGGAAAGGTGCCAATAACTCAGGGAATCACCATAGCGGCAACACCAACAATCATAACAATAATAGCGACAGTGAGTGA 1134 0.5996 MDDEEEIQSHLSPASGSPASSPRENGRITVTVAAPAPQQQPPPPPNSLALALPIQQQPRGNGGGSGGCGGGGGGGREDCWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVADIVSGREDYTKAPKTDIQCKNRIDTVKKKYKLEKSKIAAGGAPSKWPFYDRLDQLIGPTAKIPPGNAAAPAQKVPLGIPVGIRGANQYQPQKNQSQSQSKQLKNQKLTFRRRPPAPPAPAESDSSERDAVASPVSSESFPPESYEKKRPRLQQREMEMNSNAMRGRGGKGKRKGWGSAVRELTQAILKFGEAYEQAESSKLQQVVEMEKQRMKFAKDLELQRMQFFMKTQLEISQLKLGRKGANNSGNHHSGNTNNHNNNSDSE* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2039 377 MobiDBLite consensus disorder prediction 352 377 - -
Dod06g2039 377 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 32 350 IPR044823 -
Dod06g2039 377 Gene3D - 80 145 - -
Dod06g2039 377 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 32 350 - -
Dod06g2039 377 MobiDBLite consensus disorder prediction 1 80 - -
Dod06g2039 377 Pfam Myb/SANT-like DNA-binding domain 77 168 IPR044822 -
Dod06g2039 377 MobiDBLite consensus disorder prediction 199 217 - -
Dod06g2039 377 MobiDBLite consensus disorder prediction 350 377 - -
Dod06g2039 377 MobiDBLite consensus disorder prediction 195 289 - -
Dod06g2039 377 MobiDBLite consensus disorder prediction 10 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2039 Dod-Chr6 34435555 34436688 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2039 1 363 Trihelix Transcription Factor Family AT3G14180 46.325 3.41e-101 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dod06g2039 Myb_DNA-bind_4 1.2e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2039 - - adu:107464875 462.996