Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2026 ATGGGACCTCAAATTTCCCTTTTACTCCCTCTTATAGTCCTCTTGTGTTCTTTCCATGCTATTGTAGCTAACCGTCTCATCCAACAAACCTGCAAGAATTGCTCAGAAACTGATTCTAATATAAGCTACAAATTCTGCATAACTTCTCTTCAGTCACACCCTAGGAGCCACTGCGTCAAAAGCCTCGATGAACTAGGCCTCATCTCTATCAAGCTGGTCAGGCACAACGTGACTGATACTAGAGTTCACATCAAAGAGCTTTTGAAGAAGAAGAAGAAGTTAGACCCATTTATCAAAGAATGCTTAAATGATTGCCTTGAAGTTTATTCTGACGCCATCACAACTCTTAGAGAAGCCATCAAAGATTACAAGGCTAAGCGTTATGCAGATTCTAATGTCAGGTTGAGCTCAGTCATTGATGCATCCACGACATGTGAAGATGGATTCAACCAAAAGAATCGCGTCATCTCGCCACTAACAAAACGAAACAAGGACACTTTTCAGCTTTCTGCCGTAGCGCTTTCGATCATTAACATGCTCAATATAGACAAATTAATGGGAACATTCTGA 570 0.4088 MGPQISLLLPLIVLLCSFHAIVANRLIQQTCKNCSETDSNISYKFCITSLQSHPRSHCVKSLDELGLISIKLVRHNVTDTRVHIKELLKKKKKLDPFIKECLNDCLEVYSDAITTLREAIKDYKAKRYADSNVRLSSVIDASTTCEDGFNQKNRVISPLTKRNKDTFQLSAVALSIINMLNIDKLMGTF* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2026 189 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 24 180 IPR035513 -
Dod06g2026 189 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 180 IPR006501 GO:0004857
Dod06g2026 189 Pfam Plant invertase/pectin methylesterase inhibitor 26 176 IPR006501 GO:0004857
Dod06g2026 189 Coils Coil 106 126 - -
Dod06g2026 189 SMART PMEI_2 22 176 IPR006501 GO:0004857
Dod06g2026 189 PANTHER PECTINESTERASE INHIBITOR DOMAIN-CONTAINING PROTEIN-RELATED 14 183 - -
Dod06g2026 189 Gene3D Invertase/pectin methylesterase inhibitor family protein 22 181 IPR035513 -
Dod06g2026 189 CDD PMEI-Pla_a_1_like 31 179 IPR034088 -
Dod06g2026 189 PANTHER PECTINESTERASE INHIBITOR-LIKE 14 183 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2026 68 183 Carbohydrate Esterase AT3G14310 31.250 3.54e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2026 - - gmx:100306248 263.848