Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2023 ATGTTCGAGCCAGTGTATGTAGTTGTGTTAAAACGGGATTGTGCCCGTTTTGGAAGTTCATCAATCTTCGTTTTAAAGTTTCAGCGTTTATTCAGAGCCCCAAGGTGGGTGTTCTATTACCCGAAAAGGAGGAGAAAATCGAGCAGCTTCAGTAAAGGGGCAAAAAGAAAGAAAATGGTAGAGAAATCCATGGCACTTGAAGCTATTATAAAGGAAGCTGTTGATCTGGAGAACATTCCCCTTGAGAAGGTTTTTGATAATCTTAAATGCACAAGAGAAGGTTTAAGCTCCAAGCAAGTACAAGAGAGGCTAGACTTGTTTGGATACAATAGGCTTGAAGAGAAGAAGGAAAGTAAAATACTGAAGTTTTTGGGCTTTATGTGGAATCCTCTGTCATGGGTTATGCAAATTGCTGCTATAATGGCCATTGCTATGGCACATGGAGGAGAGAAAGGTGGAGATTATCAAGACTTTGCTGGCATAATTATTTTGCTAATTATAAACTCTACCATCAGTTTTATAGAAGAAAATAATGCTGGCAATGCAGCTGCCGCACTTATGGCAAGATTGGCCCCAAAAGCAAAGGTACTCCGTGATGGAAAATGGAGTGAGGAAGATGCTTCAATGTTGGTTCCTGGAGACATTATCAGCATCAAGTTGGGTGACATCATTCCTGCTGATGCACGTCTCCTTGAGGGAGATCCTTTGAAGATTGATCAGGCAAGGATATGTTTCTGTTTGTTTCAGTCTGCTCTAACTGGTGAGTCACTTCCTGTCACAAAAAGTCCTGGAGAAGGAGTATATTCTGGTTCAACTTGCAAGCAAGGAGAAATTGAGGCAGTAGCTATCGCAACCGGAGTTCACACTTTCTTCGGGAAGGCAGCTCATCTAGTTGAAAGTACCACACATGTTGGCCATTTCCAGCAGGTTCTAACATCTATTGGGAATTTCTGCATCTGTTCCATTGCTGTTGGAATGCTTATTGAAATAATTGTGATATATGGGATCCAGAAGAGGAAATACCGAGTTGGCATTGATAATCTCCTTGTGCTACTAATTGGTGGGATCCCTATTGCAATGCCAACTGTCCTTTCTGTTACAATGGCCATTGGTTCACACCGGTTGTCTCAGCAGGGTGCAATAACAAAGAGAATGACTGCCATTGAAGAAATGGCTGGAATGGATGTGTTATGTAGTGACAAAACAGGCACATTAACTCTTAACAAGCTTACAGTGGACAAGAATATGATTGAGGTTTTTGCCAAAGGTGTTGACAAGGACATGGTTGTACTTATGGCCGCAAGAGCATCAAGGCTAGAGAACCAGGATGCAATTGATAATGCAATTGTTTCAATGTTAGCAGACCCAAAAGAGGCAAGAGCTGGAATAAAGGAAGTTCATTTCCTTCCATTCAATCCAACTGATAAAAGAACTGCACTTACATATATGGATGCTGCTGGCAAGATGCACAGGGTTAGCAAAGGTGCTCCAGAGCAGATCCTCAATCTTGCACATAACAAATCAGAAATTGGACAGAAAGTTCATGCAATTATTGACAAGTTTGCAGAACGTGGACTTCGTTCTCTTGCAGTCGCCCGCCAGGATGTACCAGAGGGAAATAAAGACAGTCCAGGAGGCCCCTGGGAATTTGTTGCCCTTCTCCCTCTTTTTGACCCCCCTCGCCATGATAGTGGGGAAACAATCAGAAGAGCTCTTGATCTTGGTGTCAGTGTCAAAATGATCACTGGTGATCAACTAGCAATAGCTAAGGAAACAGGAAGGCGACTAGGAATGGGCACTAACATGTATCCTTCTTCATCACTGCTTGGAGAAAGAAAAGATGAACTTGTTGCTGTCTCCATTGATGAGCTGATTGAAAACGCTGACGGTTTTGCTGGTGTCTTTCCTGAGCACAAGTATGAGATTGTGAGGAGGTTACAAGCTAAAAAGCACATTTGTGGGATGACTGGTGATGGGGTGAATGATGCACCTGCCCTGAAGAAAGCTGACATAGGTATTGCCGTAGCAGATTCTACTGATGCAGCCCGAAGTGCTTCTGACATAGTGCTAACAGAACCTGGGTTGAGTGTGATCATAAGTGCAGTTTTAACAAGCCGTGCAATTTTCCAGAGAATGAAAAACTACACAATATATGCTGTATCTATCACCATTCGTATTGTGCTTGGCTTCATGTTACTGACTTGCCTTTGGAAATTTGATTTTCCTCCCTTTATGGTTCTTGTCATTGCCATTCTCAATGACGGAACCATCATGACAATATCAAAAGATAGGGTTAAGCCTTCTCCAATTCCTGATAGTTGGAAGCTCAGTGAAATTTTCGCGACTGGAATTGTTCTTGGTAGCTATCTGGCTCTGATGACTGTGATCTTCTTCCTGCTGACTTATGAAACAGACTTCTTTCCAAACCATTTTGGTGTGAGACACTTCCGCAACAGTCCAGATGATCCTGTTACTGAGGAAATGAAAGAAATGTTGGCTTCTGCTGTATATCTTCAAGTCAGTACAATTAGTCAAGCCTTAATTTTTGTGACACGTTGCAGGGGTTGGTCCTACATGGAAAGACCTGGTCTTTTGCTTGTTATTGCCTTCATTATTGCTCAGCTGATTGCAACTGTTATATCGGCCACTATTACTTGGAAAACTGCTGGAATCAGAAGCATTGGTTGGGGCTGGACAGGAGTTATATGGTTGTTCAATATTGTAACTTATGTATTTCTGGATCCTTTAAAGTTTTCTGTTCGTTACGCATTAAGTGGAAGAGCATGGAATCTGGTGGTAAACCAACGGACTGCATTAACCAACAAAAATGACTTTGGTAGAGAAGCTCGTGAGGCTGCATGGGCTGCTGAGCAGAGAACCTTACACGGCCTCCAGCCTGTTGAGTCAAAAACGTTTACAGAGAAGCACACCTTCAGAGAGATAAATACATTGGCAGAAGAGGCTAGGAGGCGAGCAGAGATAGCAAGGTGGTTGAGAGAGCTTCACACTCTAAAAGGCAGAGTGGAATCATTTGCCAAGCTAAGGGGTTTGGACATTGATGCCATGAATGGGCACTACACTGTCTAA 3087 0.4273 MFEPVYVVVLKRDCARFGSSSIFVLKFQRLFRAPRWVFYYPKRRRKSSSFSKGAKRKKMVEKSMALEAIIKEAVDLENIPLEKVFDNLKCTREGLSSKQVQERLDLFGYNRLEEKKESKILKFLGFMWNPLSWVMQIAAIMAIAMAHGGEKGGDYQDFAGIIILLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASMLVPGDIISIKLGDIIPADARLLEGDPLKIDQARICFCLFQSALTGESLPVTKSPGEGVYSGSTCKQGEIEAVAIATGVHTFFGKAAHLVESTTHVGHFQQVLTSIGNFCICSIAVGMLIEIIVIYGIQKRKYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNMIEVFAKGVDKDMVVLMAARASRLENQDAIDNAIVSMLADPKEARAGIKEVHFLPFNPTDKRTALTYMDAAGKMHRVSKGAPEQILNLAHNKSEIGQKVHAIIDKFAERGLRSLAVARQDVPEGNKDSPGGPWEFVALLPLFDPPRHDSGETIRRALDLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGERKDELVAVSIDELIENADGFAGVFPEHKYEIVRRLQAKKHICGMTGDGVNDAPALKKADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLTCLWKFDFPPFMVLVIAILNDGTIMTISKDRVKPSPIPDSWKLSEIFATGIVLGSYLALMTVIFFLLTYETDFFPNHFGVRHFRNSPDDPVTEEMKEMLASAVYLQVSTISQALIFVTRCRGWSYMERPGLLLVIAFIIAQLIATVISATITWKTAGIRSIGWGWTGVIWLFNIVTYVFLDPLKFSVRYALSGRAWNLVVNQRTALTNKNDFGREAREAAWAAEQRTLHGLQPVESKTFTEKHTFREINTLAEEARRRAEIARWLRELHTLKGRVESFAKLRGLDIDAMNGHYTV* 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2023 1028 SFLD Haloacid Dehalogenase 380 707 - -
Dod06g2023 1028 SMART Cation_ATPase_N_a_2 75 147 IPR004014 -
Dod06g2023 1028 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 94 882 IPR006534 GO:0008553|GO:0016021|GO:0120029
Dod06g2023 1028 SUPERFAMILY HAD-like 394 703 IPR036412 -
Dod06g2023 1028 Gene3D - 395 693 IPR023214 -
Dod06g2023 1028 Gene3D - 192 285 - -
Dod06g2023 1028 PANTHER PLASMA MEMBRANE ATPASE 61 1007 - -
Dod06g2023 1028 CDD P-type_ATPase_H 94 918 IPR006534 GO:0008553|GO:0016021|GO:0120029
Dod06g2023 1028 PRINTS H+-transporting ATPase (proton pump) signature 837 858 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod06g2023 1028 PRINTS H+-transporting ATPase (proton pump) signature 656 672 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod06g2023 1028 PRINTS H+-transporting ATPase (proton pump) signature 687 712 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod06g2023 1028 PRINTS H+-transporting ATPase (proton pump) signature 628 644 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod06g2023 1028 PRINTS H+-transporting ATPase (proton pump) signature 514 532 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod06g2023 1028 Pfam E1-E2 ATPase 190 377 - -
Dod06g2023 1028 Pfam Cation transporter/ATPase, N-terminus 78 141 IPR004014 -
Dod06g2023 1028 PRINTS P-type cation-transporting ATPase superfamily signature 398 412 - -
Dod06g2023 1028 PRINTS P-type cation-transporting ATPase superfamily signature 552 563 - -
Dod06g2023 1028 PRINTS P-type cation-transporting ATPase superfamily signature 656 675 - -
Dod06g2023 1028 PRINTS P-type cation-transporting ATPase superfamily signature 574 584 - -
Dod06g2023 1028 PRINTS P-type cation-transporting ATPase superfamily signature 679 691 - -
Dod06g2023 1028 PRINTS P-type cation-transporting ATPase superfamily signature 248 262 - -
Dod06g2023 1028 PANTHER CALCIUM-TRANSPORTING ATPASE 61 1007 - -
Dod06g2023 1028 SFLD p-type atpase 380 707 IPR044492 -
Dod06g2023 1028 SUPERFAMILY Calcium ATPase, transmembrane domain M 75 924 IPR023298 -
Dod06g2023 1028 Gene3D - 154 891 - -
Dod06g2023 1028 ProSitePatterns E1-E2 ATPases phosphorylation site. 400 406 IPR018303 -
Dod06g2023 1028 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 161 418 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod06g2023 1028 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 631 736 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod06g2023 1028 Gene3D - 410 557 IPR023299 GO:0000166
Dod06g2023 1028 Gene3D - 976 1028 - -
Dod06g2023 1028 SUPERFAMILY Calcium ATPase, transduction domain A 192 298 IPR008250 -
Dod06g2023 1028 Pfam haloacid dehalogenase-like hydrolase 394 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2023 Dod-Chr6 32897486 32905985 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2023 66 1028 Primary Pumps ATPases AT3G47950 78.838 0.0 1518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2023 K01535 - gmx:100794938 1641.71