Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2013 ATGGTGATGGTGATGGTGATGAAGAAGGGAATGATGAAATATATGGGTATGGATGAGAAAATGGATGGTTGTTGTATATGGATGGAGGTTGAAGATGAAAGGCATCAACGTGAACTTGACCTATATTATCATTACTCAATGAACGGGGTTGAAATTGCGACAGTAGTGTTGGGCCTGTCCTACAACAGAAGCCCACAACGGCAATATACCCGAATTCAATCACACAACGACGGTTGCCTCCACATTCTTCTAATCAGCTCTCTCTCCCTCTCACTCTGTCTCTGTGACACACCCGCCTTTTCTCTGCGACCTTGCGAGACCGAGCGATCCGACCACTTTCTCGCCATGTTTCGCCGAGCAACAACCCTTCTCCAGCGACCCCTTCTCGGCTCGGCGTCCCTGCGGTTCTCCACGGATCTGCCGGCGGCACCCAGGGCGGATTCGAGCTTCGTGGAGGCATGGAAGAAAGTGAGCCCGAACCTGGACCCTCCAAAGACTCCTCTGGCCTACATGAAGCCTCGCCCCCCTACTCCCTCTTCCCTCCCTACCAAACTTACCGTCAACTTCGTCCTCCCTTACGCCTCCGAGCTCTCCGCGAAAGAGGTTGACATGGTCATAGTACCTGCAACTACTGGCCAGATGGGTGTTCTCCCTGGACATGTAGCCACAATTGCAGAGTTGAAGCCTGGCATCCTATCTGTACACGAGGGGAATGACGTGGCCAAGTATTTTGTCAGCAGTGGCTTTGCGTTCATCCATGCAAACTCAGTTGCCGATATAATAGCAGTTGAGGCTGTACCGCTAGATCGAATTGATGCAAATCTAGTCCAGAAGGGTCTTCAAGAGTTCACTCAGAAGCTGAGCTCAGCCACAACTGATTTGGAGAAAGCTGAAGCTCAAATTGGGGTTGATGTCCATAGCGCTCTCAACTCCGCTCTTTCAGGCTAA 948 0.5127 MVMVMVMKKGMMKYMGMDEKMDGCCIWMEVEDERHQRELDLYYHYSMNGVEIATVVLGLSYNRSPQRQYTRIQSHNDGCLHILLISSLSLSLCLCDTPAFSLRPCETERSDHFLAMFRRATTLLQRPLLGSASLRFSTDLPAAPRADSSFVEAWKKVSPNLDPPKTPLAYMKPRPPTPSSLPTKLTVNFVLPYASELSAKEVDMVIVPATTGQMGVLPGHVATIAELKPGILSVHEGNDVAKYFVSSGFAFIHANSVADIIAVEAVPLDRIDANLVQKGLQEFTQKLSSATTDLEKAEAQIGVDVHSALNSALSG* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2013 315 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 185 266 IPR036771 -
Dod06g2013 315 Coils Coil 280 300 - -
Dod06g2013 315 Gene3D - 175 271 IPR036771 -
Dod06g2013 315 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 116 315 IPR001469 GO:0015986|GO:0045261|GO:0046933
Dod06g2013 315 CDD F1-ATPase_delta 185 308 IPR001469 GO:0015986|GO:0045261|GO:0046933
Dod06g2013 315 Gene3D - 272 314 - -
Dod06g2013 315 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 185 257 IPR020546 GO:0015986
Dod06g2013 315 Hamap ATP synthase epsilon chain [atpC]. 183 303 IPR001469 GO:0015986|GO:0045261|GO:0046933
Dod06g2013 315 PANTHER ATP SYNTHASE SUBUNIT DELTA', MITOCHONDRIAL 116 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2013 Dod-Chr6 32437951 32442221 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2013 116 315 Primary Pumps ATPases AT5G47030 74.146 5.26e-108 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2013 K02134 - gmx:100799603 328.561