Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2009 ATGGCTTTTCGGCTTTCATCTTTCGTGATCGTGCTGGCATATGCTGCGCTTACGGTTCTTGTCGCGTTGACGGCATGTTGGTATGTCATGGTCACACATATCGAGAAACGTGACAATTTGAAGTCAGAATTTTTTATCTCCCATTTGCAATCAGAAATTGAGTACTCAGCCGAACTGTTACTCCCTATGAAATCATCCTCAACCAATTTAGCAAGATTTCTGAGTTCAGCTCTCAATGCTTCTAGTATCTCTTTCTCGGATGTTGAGACCAAGGTGGCTCCGTTATTGTTCCAAGCATTTGAGACAGTTCCTCATTTAGCCCAGATTTCATACATAGGGATGGAAGGTCTCTTCTTTTCATACTACACTGATCACGGTCAAGTTCTAGCAATGTACTCCAACTCATCATCATCTTCGTCTACTAGTGGCGGTGCCTCAAATATAACACTATACTATATCCAGCGTGTAAATCGAGACACTGGAGAGGTCTATGGGGAAGCCACAACATCTAATCCCTCAATTAACCCAAGTTGGATTCGGGAAGATGTTAATGTTTCTTACGGCGGATATGCCTCAATGGGAACCAAGTGGGGCAGTGACCATGATGATCTTTTGTTTCTCAGCTCAAATAGAATCACAAGATCAACAGGTGTGATCTCTCTGGGGTATTCAGCGTCAGCAATAACTGAATTTTTCACTCGCATTGGCAATCAGGGTTCAAGCTTGTATTTGGCTACCAAAGATGGGAAAGTTATTTTAGAAGGGATTCAAGATACCCGTTTGGTTATTTCTAATGATATAGTTTCGCTCCAATCAGTGGATGCAAATACCAATCATACCAGCAACGAAGGCACTGTATCATGCAAGGATGGGGCCGTTGGTTCCAGATTGAATATTCAGGATACTGAATATTTAGTTCACTGCCACCCCATTGATGTAATGGGAATAGAATCGGTGTATGTTTTGGCCGTCCCAAGAAACGGACCAGTCATCTTTGATCACAATTATAATAAAAAGGGGCTGATATTGTTGATTGTAATGATGGTCATGCCGTTTATTGCTATCTTCAGCTTTCTATTCGTCAATGCTAAAGCCTCTAAGCGAGAAATGCATTTGTGTGCATCACTCATCAAACAGATGGAAGCAACCCAACAAGCTGAGAGAAAGAATATGAATAAAAGCCTGGCTTTTGCTAGTGTCAGCCATGATGTCCGGGCTTCTCTCGCGGGCTTAACTGGTTTGATAGAGATGTCCTATGAGTTAGTTGAACCGGGTTCAGAATTGAAGACCAATTTGGAACAAATGGATGATTGCACCAAAGACTTACTAGGACTGTTGAATTCTATACTTGACACAAGCAAAATTGAGGCAGGAAAAATGCAGCTTGAGGAAGAGCAATTTGAAGTATCCCATCTCTTGGAAGATGTAGTTGATTTATACCATCCTGTGGCTATGAAGAAAGGTGTAGATCTTGTGTTGGACCCTTGTAATGGTTCTGTTATCAGATATTCGCATGTGAAAGGAGACAGGGGAAAACTCAAACAAGTTTTGTGTAATTTACTGAACAATGCTGTTAAATTTACTGATGAGGGGCACATAGTAATTCGGGCATGGGCTCAGAAGCCAAGCTTACAGGACTCAATAATGGCTACCAAACAACGTAGTTTGATGAAACATTTATCATCCTTATTTATCAAGAAAAGCGAAGCACCTGATGACCTTGAAGCCATGAATTCAATCCAACAAGATCCAAATTCTCTGGATTTTATATTTGAAGTGGATGATACAGGAAAAGGAATTCCTAAAGAGAATCACAAGTCTGTGTTTGAGAATTATGTCCAAGTCAAAGAAAGTGCTCTTGGCCACGGAGGAACTGGCTTGGGACTTGGTATTGTGCAGTCCTTGGTTCGTTTGATGCATGGAGATATTGGAATACTAGACAAGGAAATTGGCGAGAAAGGAACTTGCATTAGGTTCAATGTGCTCCTGACTGTATGTGAGACAGTTATGAATATTGGTAGTACAAGGGAAGGTGCTGAATATGGATCAAGTGGCAGAAACCAAACTAGAGGATCAACTCTTCAAACTTGTAGTTCTGGTTCAAGCATTTGTTCCATGAGTCCCAGGTTGCGTATCTACAACTCTAGTCCTAGGCCAGAGTCTTCCCAAGTTGTCCTTCTGATTGCTGATGAAGAGCGGCGAAGGACTACAAAGAGGTTCATGGAGAGCTTAGGGATCAAAGTTAAGGTTGTGAAGCGGTGGGAACAATTGTGTCATGCTCTCAAGAAGATCAAACAGGAGGGTCTCCATTCCAGCAGCCACAGTTCTCAAGGGTCAGAGTATTTGAGTTCAAGGTCTGCGTCTCGAAATTCTCTTGCAAGAGCTAGAGGGGTTCCTTTGAGTGCTTTGGATGGAATTGAGTACATACCTTCAGTCTTCAAGAAGACAGATATTGGAGCTACCCCGGGTTTCATATTGATTGTCATTGATGCAAATGCAGGACCGTTTTCTGAGCTTTGCAGGATTGTGTCCAACTTCAGAAGAGACCTCTGTAACCCTTGTAGGGTTGTTTGGTTAGAAAAGCCACTTATGCGTAGTATTGACTTCAAGACCCTTGATAGGGATATGGTTGATCCAAACGACTTTGTCATATCCAGACCGTTTCATGGTAGTCGTTTGTTCCAGGTCATAAAGCTTCTTCCAGAGTTTGGTGGTGATTGGCAAAGCAGTTCTAATAGTAAGTCAAACACAGAAAGTGCTCATGACGTAGTTGGAAAGACTTGCACGGATTCGAGCTTATCAAAATATCAACCGCATCTACTGGAGAGATCAGAAAGTGGAAGTGTAGATCAATGTTTTGCTCAGTCCAAAGCAAGAAAATGTCCTCCTCATCAAGGAGAGATACAAGAATGTGGGGACTTGAGCCATAACAAGCCCTTGAGTGGCAAGAAAATTTTGGTTGTTGAGGACACTGAATTGTTGCGCAAGCTTGCTTTGGCTACTTTGATTCCGCTGGGTGCAACTGTAGAGCAGTGTTCGAATGGCGAAGAGGCTGTGCAGCTAGTTCGTGGTGGCCTAATTAGGGATATTTCTAATCCACCTTATGATTACATCCTAATGGATTGCCAGATGCCAGTAATGGATGGGTTTGAAGCAACAAGACGGATACGGAAGATGGAGAAGCGCTATGATGTTCGCATTCCTATTATTGCATTAACAGCTTACACTGACAAAATGACTTCAGAAGCTGGAATGGACTTTCATTTGGAGAAGCCTATTAAGAGAGATGATTTACTTGAAGCCATCCGATACATCCATGGTAAAGAATGA 3330 0.4222 MAFRLSSFVIVLAYAALTVLVALTACWYVMVTHIEKRDNLKSEFFISHLQSEIEYSAELLLPMKSSSTNLARFLSSALNASSISFSDVETKVAPLLFQAFETVPHLAQISYIGMEGLFFSYYTDHGQVLAMYSNSSSSSSTSGGASNITLYYIQRVNRDTGEVYGEATTSNPSINPSWIREDVNVSYGGYASMGTKWGSDHDDLLFLSSNRITRSTGVISLGYSASAITEFFTRIGNQGSSLYLATKDGKVILEGIQDTRLVISNDIVSLQSVDANTNHTSNEGTVSCKDGAVGSRLNIQDTEYLVHCHPIDVMGIESVYVLAVPRNGPVIFDHNYNKKGLILLIVMMVMPFIAIFSFLFVNAKASKREMHLCASLIKQMEATQQAERKNMNKSLAFASVSHDVRASLAGLTGLIEMSYELVEPGSELKTNLEQMDDCTKDLLGLLNSILDTSKIEAGKMQLEEEQFEVSHLLEDVVDLYHPVAMKKGVDLVLDPCNGSVIRYSHVKGDRGKLKQVLCNLLNNAVKFTDEGHIVIRAWAQKPSLQDSIMATKQRSLMKHLSSLFIKKSEAPDDLEAMNSIQQDPNSLDFIFEVDDTGKGIPKENHKSVFENYVQVKESALGHGGTGLGLGIVQSLVRLMHGDIGILDKEIGEKGTCIRFNVLLTVCETVMNIGSTREGAEYGSSGRNQTRGSTLQTCSSGSSICSMSPRLRIYNSSPRPESSQVVLLIADEERRRTTKRFMESLGIKVKVVKRWEQLCHALKKIKQEGLHSSSHSSQGSEYLSSRSASRNSLARARGVPLSALDGIEYIPSVFKKTDIGATPGFILIVIDANAGPFSELCRIVSNFRRDLCNPCRVVWLEKPLMRSIDFKTLDRDMVDPNDFVISRPFHGSRLFQVIKLLPEFGGDWQSSSNSKSNTESAHDVVGKTCTDSSLSKYQPHLLERSESGSVDQCFAQSKARKCPPHQGEIQECGDLSHNKPLSGKKILVVEDTELLRKLALATLIPLGATVEQCSNGEEAVQLVRGGLIRDISNPPYDYILMDCQMPVMDGFEATRRIRKMEKRYDVRIPIIALTAYTDKMTSEAGMDFHLEKPIKRDDLLEAIRYIHGKE* 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2009 1109 Pfam Response regulator receiver domain 985 1103 IPR001789 GO:0000160
Dod06g2009 1109 SUPERFAMILY CheY-like 979 1105 IPR011006 -
Dod06g2009 1109 PRINTS Bacterial sensor protein C-terminal signature 589 603 IPR004358 GO:0016310|GO:0016772
Dod06g2009 1109 PRINTS Bacterial sensor protein C-terminal signature 607 617 IPR004358 GO:0016310|GO:0016772
Dod06g2009 1109 PRINTS Bacterial sensor protein C-terminal signature 623 641 IPR004358 GO:0016310|GO:0016772
Dod06g2009 1109 Pfam His Kinase A (phospho-acceptor) domain 395 458 IPR003661 GO:0000155|GO:0007165
Dod06g2009 1109 Gene3D - 965 1107 - -
Dod06g2009 1109 Gene3D - 379 459 - -
Dod06g2009 1109 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 508 663 IPR003594 -
Dod06g2009 1109 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 447 659 IPR036890 -
Dod06g2009 1109 ProSiteProfiles Histidine kinase domain profile. 399 665 IPR005467 -
Dod06g2009 1109 SMART HKATPase_4 508 665 IPR003594 -
Dod06g2009 1109 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Dod06g2009 1109 SMART HisKA_10 392 458 IPR003661 GO:0000155|GO:0007165
Dod06g2009 1109 PANTHER HISTIDINE KINASE CKI1-LIKE 35 1103 - -
Dod06g2009 1109 SMART REC_2 983 1102 IPR001789 GO:0000160
Dod06g2009 1109 ProSiteProfiles Response regulatory domain profile. 984 1106 IPR001789 GO:0000160
Dod06g2009 1109 CDD REC_hyHK_CKI1_RcsC-like 985 1102 - -
Dod06g2009 1109 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 380 460 IPR036097 GO:0000155|GO:0007165
Dod06g2009 1109 Gene3D - 460 670 IPR036890 -
Dod06g2009 1109 PANTHER TWO-COMPONENT HISTIDINE KINASE 35 1103 - -
Dod06g2009 1109 CDD HisKA 390 454 IPR003661 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2009 Dod-Chr6 32213262 32219390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2009 11 1108 Histidine Kinase Gene Family AT2G47430 39.895 0.0 748
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod06g2009 HATPase_c 2e-23 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2009 - - cam:101504256 1313.13