Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2004 ATGGCATTGGAAGGTAATGTGGGATTTCGATCTGTCCCAGGAAGTAATTTTGGTGTTATAAGGAATGCTCGTGCACAGGCACCTATGCCATATGCTGGAGGGATCCTTTCTGGGCCAATGCAATCCATGGGAAACCAGGGTGGAATGCAAAGAAATAGTCCTGATGGAGAGAGGTGGCAGCGTGCTGCTAGCTTCCAGCAAAGGGGTTTAATTCCTTCGCCTACTCCTCAAACTCCTTTACAAGTGATGCACAAGGCTGAGAAGAAGTATGAAGTGGGTAAAGTGGAGGATCTAGAAGAGGTAAAGCAGAGGCAGTTGAAAGCTATCTTGAACAAACTAACTCCTCAGAATTTTGAGAGACTTTTTGAACAGGTAAAAGCAGTTAATATTGACAATGCTGTCACTCTCACTGGCGTCATCTCACAAATATTCGAGAAGGCTTTGATGGAACCTACCTTCTGTGAAATGTATGCCAACTTCTGTTTACATCTGGCTTCTGAGTTGCCTGATTTCAGTGAGGACAATGAAAAGATAACTTTCAAGAGGTTATTATTAAACAAGTGCCAGGAAGAATTTGAGAGGGGTGTAAGAGAACAAGAAGAAGCAAATAAGGCTGATGAAGGTGAGGTCAAGCAATCTGATGAAGAAAGGGAAGTGAGAAGAGTCAAGGCGAGAAGACGCATGTTGGGTAACATTAGATTGATTGGAGAACTATATAAGAAGAAAATGTTAACAGAGAGGATAATGCATGAGTGCATCAAGAAGTTACTGGGTCAGTGTCAGGATCCTGATGAGGAAGATGTTGAAGCTCTGTGCAAGCTGATGAGTACTATTGGGGAGATGATCGACCATCCCAAAGCCAAGGAACATATGGATGCCTACTTTGAAAGGATGAAGTTATTATCGAACAACATGAATTTATCTTCTAGGGTGAGGTTCATGTTGAAGGATGCCATTGATTTGAGGAAGAATAAATGGCAACAAAGGAGGAAAATTGAAGGTCCAAAGAAGATTGAGGAGGTGCACAGAGATGCTGCACAAGAGAGGCAAGCCCAAGCTGGTCGGCTGGGTCGTGGTCCGAGCAACAATCCTTCAGCGAGAAGGAACCCCATGGACTTTGGTCCAAGAGGATCATCTATGTTGTCTTCTCCTAATGCTCAGATTGGTGGACTGCATGGGCTGCCTGCTCAAGTTCGTGGGTTTGGTTCTCAGGATGCTCGTTTTGAGGAGAGGCAATCTTATGAGGCCAGGACCTTGTCAGTTCCTTTGCTTCAAAGACCATTGGGTGATGATTCTATAACCTTGGGGCCCCAAGGTGGTCTAGCTGGGGGAATGTCCATTAGAGGATCAGCAGCAATTTCGAGTCCATTGATTTCCGATGTACTTTCTGGCCCTACTGATTCTCATAGAGCGACTAGTGGTCTTAATGGTTATGGCAGTTCATCAGTGTGTGCACCGTACATTGCAAGAGAGGATCTTGCATCAAGATACTCGATGGATAGGTTTTCAGGTCCAGCTGCTTATGATCAATCAAGTGCTTCAGAACGCAATATAAGCTATGGTAACAGAGACTTGAGGAATGCAGATCGGAATCTAGACAGACCTGTTGCAACATCACCTCATGCTCAATCGCAAGGGTCCATATTCTCCCAGATTGCTTCCTCGGAGAAGGCTGAAGAGCAACTGCAGGACATGTCCATGGCTGCAATCAGAGAATACTACAGTGCTAGAGATGAGAATGAAGTTGCTTTTTGTGTCAAAGATTTGAACTCTCCAAGCTTTCATCCTTCCATGGTTTCTCTATGGGTCACAGACTCATTTGAGAGAAAGGACACAGAAAGAGATCTTTTGGCCAAACTGCTAGTTAACCTTGTGAAATCACCGGATGGCACCTTGAGTCAAGCCCAGCTTATCCAAGGGTTTGAATCTGTTCTCAGTATGTTGGAGGATGCTGTCAATGACGCCCCTAGAGCAGCAGAGTTTCTTGGCCGTATTTTTGCAAAAGTTATAACGGAGAGTGTAGTCACTTTGAATGAGATTGGGCGATTAATACATGATGGTGGAGAGGAGCCATGCAGTCTCTTACAGGTTGGACTTGCGGCCGATGTTCTTGGAAGCATCTTGGAGGTAATAAAATTGGAGAAGGGGGACACGGTTCTTAGAGATATCCTTGCAAGCTCTAACTTGCAGTTGGCAACTTTTCGGCCACCTAGTCCTGTAATATCGAGAAAGTTAGAGAAATTTATTTAG 2250 0.4458 MALEGNVGFRSVPGSNFGVIRNARAQAPMPYAGGILSGPMQSMGNQGGMQRNSPDGERWQRAASFQQRGLIPSPTPQTPLQVMHKAEKKYEVGKVEDLEEVKQRQLKAILNKLTPQNFERLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCLHLASELPDFSEDNEKITFKRLLLNKCQEEFERGVREQEEANKADEGEVKQSDEEREVRRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQCQDPDEEDVEALCKLMSTIGEMIDHPKAKEHMDAYFERMKLLSNNMNLSSRVRFMLKDAIDLRKNKWQQRRKIEGPKKIEEVHRDAAQERQAQAGRLGRGPSNNPSARRNPMDFGPRGSSMLSSPNAQIGGLHGLPAQVRGFGSQDARFEERQSYEARTLSVPLLQRPLGDDSITLGPQGGLAGGMSIRGSAAISSPLISDVLSGPTDSHRATSGLNGYGSSSVCAPYIAREDLASRYSMDRFSGPAAYDQSSASERNISYGNRDLRNADRNLDRPVATSPHAQSQGSIFSQIASSEKAEEQLQDMSMAAIREYYSARDENEVAFCVKDLNSPSFHPSMVSLWVTDSFERKDTERDLLAKLLVNLVKSPDGTLSQAQLIQGFESVLSMLEDAVNDAPRAAEFLGRIFAKVITESVVTLNEIGRLIHDGGEEPCSLLQVGLAADVLGSILEVIKLEKGDTVLRDILASSNLQLATFRPPSPVISRKLEKFI* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2004 749 Pfam MA3 domain 568 674 IPR003891 -
Dod06g2004 749 SMART if4_15 103 325 IPR003890 GO:0003723|GO:0005515
Dod06g2004 749 Gene3D - 103 338 - -
Dod06g2004 749 Pfam MIF4G domain 103 325 IPR003890 GO:0003723|GO:0005515
Dod06g2004 749 SUPERFAMILY ARM repeat 99 327 IPR016024 -
Dod06g2004 749 ProSiteProfiles MI domain profile. 561 685 IPR003891 -
Dod06g2004 749 Coils Coil 196 216 - -
Dod06g2004 749 MobiDBLite consensus disorder prediction 196 215 - -
Dod06g2004 749 SUPERFAMILY ARM repeat 557 747 IPR016024 -
Dod06g2004 749 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 15 739 IPR045208 GO:0003743
Dod06g2004 749 MobiDBLite consensus disorder prediction 328 388 - -
Dod06g2004 749 Gene3D - 553 749 - -
Dod06g2004 749 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 15 739 - -
Dod06g2004 749 MobiDBLite consensus disorder prediction 328 349 - -
Dod06g2004 749 SMART ma3_7 562 676 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2004 Dod-Chr6 31975880 31985523 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2004 5 749 Eukaryotic Initiation Factors Gene Family AT3G60240 62.101 0.0 856
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2004 K03260 - gmx:100798562 1157.13