Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1990 ATGGCTATATGCTCTACACCTTTTGTTGGGCTCTTAAATTTAGTTGCTCTAGCTGTTTGGCCAGACTGGCCTGTTATTGCTATTTGTGAGACAATGAGAAAGGCTTCTAAGCCCTCATCTGGACCACACAAATCAAGGGAATGCCTCCCATTTATCCTCATATTGCAAAACATGTTGAAGTATGCTGTGACATACCTTGAAGTCATTGCTATTCTCATGCAGCGACATGTCCTTGTTCATTGA 243 0.4198 MAICSTPFVGLLNLVALAVWPDWPVIAICETMRKASKPSSGPHKSRECLPFILILQNMLKYAVTYLEVIAILMQRHVLVH* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1990 80 Gene3D - 22 80 IPR036986 GO:0003723
Dod06g1990 80 PANTHER 40S RIBOSOMAL PROTEIN S4 35 79 - -
Dod06g1990 80 PANTHER 30S/40S RIBOSOMAL PROTEIN S4 35 79 IPR000876 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1990 Dod-Chr6 31274386 31274968 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1990 35 79 Cytoplasmic Ribosomal Protein Gene Family AT5G07090 75.556 2.80e-20 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1990 K02987 - vvi:100262686 80.1073