Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1989 ATGGCTTCGACTCACCGCCCTTTGAGTTCGGGGTCCGAAGGCGGAGATCCCGCGATGATGGACGAGAGGAAGAGGAAGAGGATGCTGTCGAACCGTGAATCGGCGAGGCGTTCGCGGATGAGGAAGCAGAAGCAGCTGGAGGACCTGACCGAAGAGATGAACCGGCTGGAGGGATCGAACAAGCACCTGGTTCATGCCATAAAGATGAAGGAGGATGCGTACGCCGAGATGGAGGCCGCCAACGACGTCCTCAAGGCTCAGACCATGGAGTTGGCCGACCGGCTGCGTTTCCTCAACTCGATCCTCGAGATCGCCGAAGAGGTCGGCGGGCTTTCCGTTGAGATCCCCGAGATCCCGGATCCTCTCCTCAGGCCCTGGCAGATTCCTCATCCAATCCAGCCAATTATGGCCTCCGCAGACATGTTCCTGTATTGA 435 0.5862 MASTHRPLSSGSEGGDPAMMDERKRKRMLSNRESARRSRMRKQKQLEDLTEEMNRLEGSNKHLVHAIKMKEDAYAEMEAANDVLKAQTMELADRLRFLNSILEIAEEVGGLSVEIPEIPDPLLRPWQIPHPIQPIMASADMFLY* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1989 144 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 26 41 IPR004827 GO:0003700|GO:0006355
Dod06g1989 144 SUPERFAMILY Leucine zipper domain 23 77 IPR046347 GO:0003700|GO:0006355
Dod06g1989 144 Coils Coil 32 87 - -
Dod06g1989 144 MobiDBLite consensus disorder prediction 1 46 - -
Dod06g1989 144 MobiDBLite consensus disorder prediction 17 46 - -
Dod06g1989 144 Gene3D - 21 75 - -
Dod06g1989 144 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 21 63 IPR004827 GO:0003700|GO:0006355
Dod06g1989 144 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 142 - -
Dod06g1989 144 CDD bZIP_plant_GBF1 24 75 IPR045314 GO:0003700|GO:0006355
Dod06g1989 144 Pfam bZIP transcription factor 23 80 IPR004827 GO:0003700|GO:0006355
Dod06g1989 144 SMART brlzneu 19 83 IPR004827 GO:0003700|GO:0006355
Dod06g1989 144 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1989 Dod-Chr6 31257375 31258749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1989 9 142 bZIP Transcription Factor Family AT3G62420 54.745 3.19e-48 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod06g1989 bZIP_1 2.5e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1989 K25786 - gmx:778144 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1989 06 31257375 31258749 Dod06g1989 06 31257375 31258749 ECH
Dod01g3154 01 72427524 72427979 Dod06g1989 06 31257375 31258749 ECH
Dod01g3154 01 72427524 72427979 Dod06g1989 06 31257375 31258749 PCT