Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1982 ATGGTGAGTGATCGTTTTTCTTTCACACCTTTCAATTTCAATGGATTCCAAGGCGGTTTTGGCTCTATACAAGACCATAATGTTGTGATCCAAGGAGAACACAGAATCTCTGTAATGGAGTTACTGGGAGACATGAATCCTGTTCCTACTTCTGAGCAAGGGAAAGAACGCCATTTTCTCAAAGAGCAAAACTTGCAGCAAAACAAACATGATTTCATGTTTGACAACTTGATGTTAGAAGAGCTCAGCTTTGACCCTACTCCACATCCAGCACAACCATTTCAAGCCCCCCCTACTAGTGGACTACAAACGAATCAAGCAGTGGGAATGATAAAAACAAGTTCACAACTTTGCGGATGCATCAATAAGCAGCTGCCACCACCACCACGTTCTTTAGCATCATCATTGGGGCTCCTGAGCAATTACGGAAGCAGGTTCAAGAGGCTAAGATGGAGAACCTTAAGCAACACTGAAACCGATGTAACCCCTCAGAAGTTGTCAACTGAAGGGATAATAAGAGTGGCCGGAGCAAGGTATGTACAATACTCTTCACTATGGCAGGAAAATTTTATCATCCCCATGCACACTTATTTTGAATTTGGTCTCGCGGGTTTATCTGAGGAAGAGAATAGGGACGTTGAACTCGCTCAGTTTCTTCTGGCCGCAGCTGAGAGGGTAGGATGCCAACAATTTGAACGCGCAAGCACATTGCTCCTCCATTGCCAGAGCAATTCATCAGCCCTTGGGAACCCTGTTCAGAGAGTTGTCTTCCATTTCGCTGAAGCGCTAAGAGAAAGGATCAACAAAGAAATAGTAGGAGGACGAGGAGGAGGAAGGGGAAGGATCATGGGACTAAAAGGGTCTCAGAAAAACCGAGAAAGGGAACTTATTGAGAAGCTGCAAGGGGATACCAATTCAGCCTTTATATGCCATCAAACAATACCCTTCAATCAAGTGATGCAGTTCGCTGGTGTACAAGCTATGGTGGAGCATGTTGCATCCCGAACCAAAATCCATCTGATAGATCTTGATGTTGGTTATGGGTTGATGTCAACGGTTCTTATTCAAGCACTGGCTGAGCGCAATGACAGGCCAGTTGAGCTTCTGAAGATAACTGCCATTGGTCACGGAAACAAGAGGGAGCTAGAATATGCAGGTAAGAGGTTAGTGAGTTTTGCTGAGTCATTGAACTTGCCTATTTTGTACAAGGCAGTTTTAGTTACGGATATTATAGAACTCAGGGAAGATCATTTTGAGATTGAAGATAATGAAGCCGTGGCTATCTACTGCCCTTATTTGCTGAGGACAATTGTGTCAAATCCTGATTCCTTGGACAACTTGATGCGGGTGATAAGGAAAATCCAACCGGCTATAATGATAGTCCTTGAGGTGGAAGCAAACCACAACTCTCCTTCCTTCGTGAACCGCTTTATCGAAACGTTGTTCTACTTCTCGGCATTTTTTGACTGCGTTGAGACCTGCGTGAAGCATGATAATGAGTGCAGGATGAGGTTAGAAGCAGTGTTATCTGAAGGGATACGAAACATTGTTGCTATGGAAGACAAAGAACGGACAGTTAGGAATGTGAAGATAGATGTTTGGAGGAGGTTCTTTGCAAGGTTCAGAATGGTGGAAACTGGATTCAGCGAGTCTTCGCTGTACCAAGCTAATTTGGTTGTCAAAAAGTTTGCGTTTGGGAATCTCTGCACTGTAGAAAAGAACGGGAAGTGTATAATAGTTGGATGGAAGGGGACCCCAATTCATTCAGTCTCAGCATGGAAGTTTCTTTGA 1791 0.44 MVSDRFSFTPFNFNGFQGGFGSIQDHNVVIQGEHRISVMELLGDMNPVPTSEQGKERHFLKEQNLQQNKHDFMFDNLMLEELSFDPTPHPAQPFQAPPTSGLQTNQAVGMIKTSSQLCGCINKQLPPPPRSLASSLGLLSNYGSRFKRLRWRTLSNTETDVTPQKLSTEGIIRVAGARYVQYSSLWQENFIIPMHTYFEFGLAGLSEEENRDVELAQFLLAAAERVGCQQFERASTLLLHCQSNSSALGNPVQRVVFHFAEALRERINKEIVGGRGGGRGRIMGLKGSQKNRERELIEKLQGDTNSAFICHQTIPFNQVMQFAGVQAMVEHVASRTKIHLIDLDVGYGLMSTVLIQALAERNDRPVELLKITAIGHGNKRELEYAGKRLVSFAESLNLPILYKAVLVTDIIELREDHFEIEDNEAVAIYCPYLLRTIVSNPDSLDNLMRVIRKIQPAIMIVLEVEANHNSPSFVNRFIETLFYFSAFFDCVETCVKHDNECRMRLEAVLSEGIRNIVAMEDKERTVRNVKIDVWRRFFARFRMVETGFSESSLYQANLVVKKFAFGNLCTVEKNGKCIIVGWKGTPIHSVSAWKFL* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1982 596 Pfam GRAS domain family 216 594 IPR005202 -
Dod06g1982 596 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 62 594 - -
Dod06g1982 596 ProSiteProfiles GRAS family profile. 206 594 IPR005202 -
Dod06g1982 596 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 62 594 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1982 Dod-Chr6 30787690 30789480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1982 213 595 GRAS Transcription Factor Family AT1G66350 28.385 1.06e-44 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod06g1982 GRAS 5.3e-77 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1982 - - aip:107615215 678.322