Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1979 ATGGTGCAAAAGAGGTTCAAGTTCCCTGAGAACAGTGTGGAACTTTATGCTGAGAAGGTGAACAACAAGGGTCTTTATGCTATTCCCCAGGCAGAGTCTCTTCGCTACAAGCTCCTTGGTATTAAGGTCAAGATCATGCTTGATTTGGATCCTAAAGGAAAGCAATGTCCTAAAACTCCCCTCCCCGATCTTGTTACAATCCACCCACCGAAGGAGGAGGAAGATTACATCCAACCTCCTGTTGTTCTGTCAAGTGATATTGAGGTCTTGTGGCTTAAAAATATTCTGATTGGCTTGTAG 300 0.44 MVQKRFKFPENSVELYAEKVNNKGLYAIPQAESLRYKLLGIKVKIMLDLDPKGKQCPKTPLPDLVTIHPPKEEEDYIQPPVVLSSDIEVLWLKNILIGL* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1979 99 PANTHER RIBOSOMAL PROTEIN S3, PUTATIVE-RELATED 1 40 - -
Dod06g1979 99 Gene3D - 2 76 IPR036419 -
Dod06g1979 99 PANTHER 30S/40S RIBOSOMAL PROTEIN S3 39 90 - -
Dod06g1979 99 PANTHER 30S/40S RIBOSOMAL PROTEIN S3 1 40 - -
Dod06g1979 99 PANTHER RIBOSOMAL PROTEIN S3, PUTATIVE-RELATED 39 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1979 Dod-Chr6 30600894 30602111 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1979 34 74 Cytoplasmic Ribosomal Protein Gene Family AT3G53870 73.171 3.20e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1979 K02985 - gmx:100808705 91.6633