Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1962 ATGGTGGCTGAAGCAGAGCTTGTGTGTCAACAGAGCGTGGCTGTGTTGGATGTGAAGTATTTTCCCAACAAAGGGAGCAGTGTTCACGAGATTGAAGACGCAGCACCTGCCATCTCGCCTCCGAGTTTTGACCGAGTTCGAGAATATGAGTCCGTCCGGGCCGAGTTACTCACTTCACAAGATGATGTTAGTTCTGCTGGCAGAATCTCAGATGCTGCTCTTGGATCTGCGGTTCTGCAATTTGTTCCCTGCATCCGATCTGGTAGTTTTGCCAACATTGGGAAACGGAGATACATGGAAGATGAACATATAAGGATAGATGATTTGTCTTCTCACCTAGGATCACTGTACAACTTTCCCAGACCAAGTGCCTTTTATGGGGTGTTTGATGGTCATGGGGGACCTGAAGCTGCAGCTTATGTAAGAAAAAATGTTATAAAATTCTTTTTCGAGGATGTTAGTTTCCCACAGACATCTGAAGTTGATAATGCGTTTCTGGTTGAGGTAGAGAATTCCCTCAGAAAGGCATTTCTTTTGGCCGACTCAGCCTTGGCCGATGACTACAGTGTGAACAGTTCATCCGGGACCACAGCCCTGACTGCTTTGATATTTGGCAGGCTTCTAATGGTGGCCAATGCTGGTGACTGCCGAGCAGTTCTCTGCCGTAAAGGAGAGGCCATTGACATGTCTCAAGATCACAGGCCGATAGACCCGTCAGAGCGGAGGCGAGTTGAAGAATTGGGTGGTTACATAGATGATGGTTATCTTAACGGGGTTTTATCTGTTACTAGAGCATTAGGGGACTGGGACATGAAGTTACCTAAGGGTGCTCCCTCTCCTTTGATTGCAGAGCCTGAGTTCCGGCAAGTGGTTCTAGCGGAGGATGATGAATTCCTGATCATAGGATGTGATGGCATCTGGGATGTGATGTCAAGTCAGCATGCTGTTAACCTCGTCCGCAGAGGCTTGAAGCGGCATGATGACCCAGAGCGGTGTGCAAGGGACCTGGTTATGGAGGCATTGCGCCTGAACACATTCGATAATCTCACGGTGATCATTGTATGTTTCTCTTCTGTTGACCAAAGTGAGCCCTCTCCATCTCCACCTCGCCAACGGAAATTGAGATGCTGTAGCCTCTCTGCAGAAGCTCTTTGTAGCTTGAGGAGCTTGCTAGAGGGCAGTGCTAGCAACTGA 1194 0.4849 MVAEAELVCQQSVAVLDVKYFPNKGSSVHEIEDAAPAISPPSFDRVREYESVRAELLTSQDDVSSAGRISDAALGSAVLQFVPCIRSGSFANIGKRRYMEDEHIRIDDLSSHLGSLYNFPRPSAFYGVFDGHGGPEAAAYVRKNVIKFFFEDVSFPQTSEVDNAFLVEVENSLRKAFLLADSALADDYSVNSSSGTTALTALIFGRLLMVANAGDCRAVLCRKGEAIDMSQDHRPIDPSERRRVEELGGYIDDGYLNGVLSVTRALGDWDMKLPKGAPSPLIAEPEFRQVVLAEDDEFLIIGCDGIWDVMSSQHAVNLVRRGLKRHDDPERCARDLVMEALRLNTFDNLTVIIVCFSSVDQSEPSPSPPRQRKLRCCSLSAEALCSLRSLLEGSASN* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1962 397 Pfam Protein phosphatase 2C 88 348 IPR001932 -
Dod06g1962 397 PANTHER PROTEIN PHOSPHATASE 2C 49-RELATED 1 379 - -
Dod06g1962 397 Gene3D - 80 363 IPR036457 -
Dod06g1962 397 SUPERFAMILY PP2C-like 81 358 IPR036457 -
Dod06g1962 397 SMART PP2C_SIG_2 101 356 IPR001932 -
Dod06g1962 397 ProSitePatterns PPM-type phosphatase domain signature. 125 133 IPR000222 GO:0043169
Dod06g1962 397 PANTHER PROTEIN PHOSPHATASE 2C 1 379 IPR015655 GO:0004722|GO:0006470
Dod06g1962 397 SMART PP2C_4 76 354 IPR001932 -
Dod06g1962 397 ProSiteProfiles PPM-type phosphatase domain profile. 86 356 IPR001932 -
Dod06g1962 397 CDD PP2Cc 85 356 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1962 Dod-Chr6 29349766 29352216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1962 99 393 PP2C-type Phosphatase Gene Family AT3G62260 70.608 5.39e-154 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1962 K14803 - gmx:100819791 694.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1962 06 29349766 29352216 Dod06g1962 06 29349766 29352216 ECH