Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1923 ATGACAATGAAGCTGGTTTTGGTAGCAGTTGCGTTTGCATTTGCATGCTTGGTTTCTGGGGTTGTGTCCTCTGGATCTGAGACACTCTCTCTGCTTTCTTTCTTAGAAAACGATGCTGTCTCGGCAATGCCATCTTCCTTCTCATACCAACCTCCCATGGTCAACCTCACCCTTATTCAAGGAGCTGCTTCTACAGGAGCTGTCTGTCTAGATGGAACATTGCCCGGTTACCATTTGGATCGTGGATTTGGATCTGGTGCAAATAGTTGGCTTATTCATTTGGAGGGAGGAGGTTGGTGCAATACTGTCAGAAACTGTATCTACAGGAAAAATACTCGTCGTGGTTCCTCAAAATACATGGAAAGTCAAATACCATTCACCGGAATATTGAGCAATAAGGCTGAAGAAAACCCTGATTTCTTTAACTGGAATAGAGTCAAATTAAGGTACTGTGATGGGGCATCTTTCAGTGGAGATAGTCAAATTGAGTCTGCCCAACTTCAATTTCGAGGACAAAAAATATGGCTAGCTGCAATCGAGGAATTGATGTTCCAAGGAATGCAGACAGCCAACCAGGCCCTTCTGTCAGGATGCTCTGCGGGTGGTCTGGCATCCATAATACATTGTGATGAGTTCCGGAGCTTGTTTACAGAATCTACCAAGGTTAAATGTTTGAGTGATGCAGGGTTTTTTCTGGATGCAATTGATGTATCTGGGAATCGAACACTGCGGAATCTGTTTGGAGGTGTAGTTCAGTTACAGGAAGTACAAAAAAACCTGCCAAAAGGTTGTCTTGACCAATTGGACCCAACTTCGTGCTTCTTTCCTCAGAATTTGGTTGAGCATATTGAGACTCCATTGTTTTTACTCAACGCAGCTTATGATGCGTGGCAGGTCCAAGCCAGTTTAGCACCACCTTCAGCTGACCCCAATGGCTTTTGGAGTGACTGCAAATCAAACCATGCAAACTGTAACTCGTCTCAAATTCAGTTTCTGCAAGATTTCAGAAATCAATTGCTAAATGACTTGAAAGACTTCTCAGGGCCATCTCAAACTGGACTGTTCATAAATTCTTGTTTTGCTCATTGCCAGTCTGAGAGACAGGAGTTGTGGTTTGCTGATAACTCTCCTCTTCTTGAGAACAAGCCAATTGCAGTTGCTGTTGGAGATTGGTATTTTGATCGAGAAGTTGTCAAAGCAATTGACTGTGCTTATCCCTGCGACAATACTTGCCATAATCTTGTGTTTAAGTGA 1254 0.4322 MTMKLVLVAVAFAFACLVSGVVSSGSETLSLLSFLENDAVSAMPSSFSYQPPMVNLTLIQGAASTGAVCLDGTLPGYHLDRGFGSGANSWLIHLEGGGWCNTVRNCIYRKNTRRGSSKYMESQIPFTGILSNKAEENPDFFNWNRVKLRYCDGASFSGDSQIESAQLQFRGQKIWLAAIEELMFQGMQTANQALLSGCSAGGLASIIHCDEFRSLFTESTKVKCLSDAGFFLDAIDVSGNRTLRNLFGGVVQLQEVQKNLPKGCLDQLDPTSCFFPQNLVEHIETPLFLLNAAYDAWQVQASLAPPSADPNGFWSDCKSNHANCNSSQIQFLQDFRNQLLNDLKDFSGPSQTGLFINSCFAHCQSERQELWFADNSPLLENKPIAVAVGDWYFDREVVKAIDCAYPCDNTCHNLVFK* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1923 417 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Dod06g1923 417 Pfam Pectinacetylesterase 50 397 IPR004963 GO:0016787
Dod06g1923 417 PANTHER NOTUM-RELATED 2 416 IPR004963 GO:0016787
Dod06g1923 417 PANTHER PECTIN ACETYLESTERASE 2 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1923 Dod-Chr6 28195820 28200724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1923 1 416 Carbohydrate Esterase AT3G62060 65.647 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1923 K19882 - gmx:100786972 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3234 01 73335703 73340577 Dod06g1923 06 28195820 28200724 ECH
Dod01g3257 01 73614544 73619909 Dod06g1923 06 28195820 28200724 ECH
Dod06g1923 06 28195820 28200724 Dod01g3234 01 73335703 73340577 ECH
Dod06g1923 06 28195820 28200724 Dod06g1923 06 28195820 28200724 ECH
Dod05g2481 05 51106641 51112199 Dod06g1923 06 28195820 28200724 ECH
Dod01g3234 01 73335703 73340577 Dod06g1923 06 28195820 28200724 PCT