Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1918 ATGGGTAACGGCACTTCTCGTGTTGTTGGGTGTTTGGTGCCATTCAATGGCAAGAGTGGTGTTGATTTAGAGTTTCTTGAGCCTTTGGATGAAGGCTTAGGCCACTCTTTCTGTTATGTGAGGCCTTCCATTTTCGAGTCTCCTGCCATCACCCCATCAAACTCAGAGAGGTTCACAGTTGATTCTAGCACCCTCGATTCTGAGACCTTGAGTGGATCCTTTAGGCATGATAGTATGGAGGATTCTTCCGGCTTACATAATAAGCCGGGCAAGAATTTTCCTGAGACCACGTTCAAGACGATTTCGGGGGCTTCTGTTAGTGCCAATGTTTCGACCGCGAGGACCGGTAACCAGAGTGCATTGTTTGCTAGTGATGCCCTGGAACCGGCTGCCTCATTTGAGGGAACCGCGTCGTTTGCGGCTATCCCTTTGCAGCCTGTTCCCCGTGGTTCTGGACCTCTGAATGGGTTCATGTCTGGACCTCTGGAGAGAGGTTATGCCTCGGGTCCATTGGATAGGGGTGGTGGTTTCATGTCTGGGCCGATAGAGAAAGGAGTTATGTCAGGTCCTCTTGATGCCACTGACAAATCCAACTTTTCGGCACCGCTTGCGCGGGGCCGCCGGAGGCAACGCCTCCAGCATCTTATGAGAAGTGTGAGTGGACCAATGAAGAACACTTTTTCGCGGACCTTCTCTAAGCATTCCATGGGTGGCAGTTGGATGCAAAGGTTATTGTTTCACCCGGTGACCCAACTAGCCTGGCATTCCAAAGAGGCAAAGTTTCGACCAGAAGTCTCGAGGAACAACTGTATTGAAGTTGGACCATCTGAGGCAGAGTACAAACATACACACAATTTGCAGTGGGCTCAAGGCAAGGCTGGTGAAGATAGGGTTCATGTAGTGCTTTCGGAAGACCAAGGGTGGTTGTTTATCGGAATATATGACGGTTTTAGTGGACCAGATGCACCTGACTTTCTGATGAGCCATCTTTATAGATTTATAGACAAGGAATTGGAAGGATTACTTTGGGATTATGAAGATGATCCTGCAAGTCCCCAAAACTGTAAATGCTGCGGTTACTTCAGAATGCAGTAG 1095 0.4895 MGNGTSRVVGCLVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFESPAITPSNSERFTVDSSTLDSETLSGSFRHDSMEDSSGLHNKPGKNFPETTFKTISGASVSANVSTARTGNQSALFASDALEPAASFEGTASFAAIPLQPVPRGSGPLNGFMSGPLERGYASGPLDRGGGFMSGPIEKGVMSGPLDATDKSNFSAPLARGRRRQRLQHLMRSVSGPMKNTFSRTFSKHSMGGSWMQRLLFHPVTQLAWHSKEAKFRPEVSRNNCIEVGPSEAEYKHTHNLQWAQGKAGEDRVHVVLSEDQGWLFIGIYDGFSGPDAPDFLMSHLYRFIDKELEGLLWDYEDDPASPQNCKCCGYFRMQ* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1918 364 Gene3D - 254 357 IPR036457 -
Dod06g1918 364 PANTHER PROTEIN PHOSPHATASE 2C 10 347 IPR015655 GO:0004722|GO:0006470
Dod06g1918 364 SUPERFAMILY PP2C-like 291 358 IPR036457 -
Dod06g1918 364 MobiDBLite consensus disorder prediction 69 94 - -
Dod06g1918 364 PANTHER PROTEIN PHOSPHATASE 2C 32 10 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1918 Dod-Chr6 28083409 28084503 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1918 1 347 PP2C-type Phosphatase Gene Family AT2G46920 73.066 5.42e-176 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1918 - - cam:101510249 646.736