Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1917 ATGATCAAGGATCAATCGTCTAACAGTGAGATAGTTGAGGAAAACGCTGAAACTAAGGTTAATGAACACCAGTTACCCAACTGTGGAAGTCAGAGTATCTCATGTACTGTTCCAGCTTCTGTTCCTCTTGAACACTTAACTGGTAAAGGTAGAAAAAGTCTCCGGCTTTATGAGTTACTTCAGATGGAATCTTGGGATGAACGTGTTTTGTTGTCAGTCTCAGAACAAGGTAAGGATTCTTTGGTGCCCAGGGAATCAACACTGGAGGGGCATATGAGACCTTGTTCATCTGGTGCTAAAGAAGATAGTTCTCGACATCAGGACGAAGATCCCACTACATCGGGAGAAAATGGATGCATTGGGTTTGATTCGACTAAGAAGGATTCTGCAGGTGCTTTTTCTCTTTCAGGACAACGGCAGAATTCTAGGAAGTCATTTATCAGCACAAAAATCAGAAAGATGTACAGGAAGCCAAAGTCCTTGTGTAAGAAACTTTTTCCTTGGAGTTATGATTGGCATAGGGAAGAGACTAGTGTTGATGAGAAAATAGTGGAAGCTTCAGGACCTATCAGAAAATGCAAGTCTGGAGTAGATCACAATGCAGTTTTGAGAGCAATGGCTCAAGCTCTTGAAAGAACAGAAGAGGTATACATGGAAATGGTGGAGAATAATCTGGACAAAAATCCAGAGCTTGCTTTAATGGGATCATGTGTTTTAGTGATGCTGATGAAGGATCAAGATGTTTATGTCATGAACCTTGGAGATAGTCGTGCAATTTTGGCTCAAGAAAGACCAAATGATCGTCATCCTAATTTAAGTTTTGTCAAGGATGATGTGAGGCATAGAAATCGATCTAGAGAGTCATTAGTAAGGATGGAGTTGGATAGGATTTCGGAGGAGTCCCCGATTCACAATCATAACAGCCATGTTAACAAGATGAACAAAAACAGAGAGATATCTATGTGCAGATTAAAAATGAGGGCTCTTCAGCTTTCCACTGATCACAGCACGGAGCATGAGCACCCTGATGATAATCAAGCTATATTAAATGATCGAGTGAAAGGACAGTTAAAAGTTACCAGGGCATTTGGTGCTGGGTTCTTGAAGAGGTCCTCTTTCAATGATGCACTACTGGAGATGTTTCAAGTCGATTATGTGGGCACGGCTGCGTATCTAAGCTGCACTCCTTCTGTTCTTCATCACCGACTTTCCTCGAGTGATCGGTTCTTGGTACTTTCTTCTGATGGGCTTTACCAATATTTCAGCAATGAGGAGGTAGTTGCCCATGTTACATGGTTCATGGAAAATGTCCCCGAAGGTGATCCCGCGCAATACCTTATTGCAGAGCTTCTCTTCCGTGCTGCTAAAAAGAATGGAATGGATTTCCATGAATTGCTTGATATTCCGCATGGAGATCGACGTAAATATCATGATGATGTATCTGTTATGGTGGTTTCTTTGGAGGGAAGGATTTGGAGATCATCAGGATGA 1491 0.4185 MIKDQSSNSEIVEENAETKVNEHQLPNCGSQSISCTVPASVPLEHLTGKGRKSLRLYELLQMESWDERVLLSVSEQGKDSLVPRESTLEGHMRPCSSGAKEDSSRHQDEDPTTSGENGCIGFDSTKKDSAGAFSLSGQRQNSRKSFISTKIRKMYRKPKSLCKKLFPWSYDWHREETSVDEKIVEASGPIRKCKSGVDHNAVLRAMAQALERTEEVYMEMVENNLDKNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNLSFVKDDVRHRNRSRESLVRMELDRISEESPIHNHNSHVNKMNKNREISMCRLKMRALQLSTDHSTEHEHPDDNQAILNDRVKGQLKVTRAFGAGFLKRSSFNDALLEMFQVDYVGTAAYLSCTPSVLHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1917 496 MobiDBLite consensus disorder prediction 81 121 - -
Dod06g1917 496 PANTHER PROTEIN PHOSPHATASE 2C 121 496 IPR015655 GO:0004722|GO:0006470
Dod06g1917 496 SUPERFAMILY PP2C-like 199 488 IPR036457 -
Dod06g1917 496 SMART PP2C_4 85 485 IPR001932 -
Dod06g1917 496 CDD PP2Cc 202 487 IPR001932 -
Dod06g1917 496 Pfam Protein phosphatase 2C 222 458 IPR001932 -
Dod06g1917 496 Gene3D - 121 493 IPR036457 -
Dod06g1917 496 MobiDBLite consensus disorder prediction 1 27 - -
Dod06g1917 496 MobiDBLite consensus disorder prediction 95 112 - -
Dod06g1917 496 PANTHER PROTEIN PHOSPHATASE 2C 32 121 496 - -
Dod06g1917 496 ProSiteProfiles PPM-type phosphatase domain profile. 158 487 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1917 Dod-Chr6 28077331 28083341 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1917 2 496 PP2C-type Phosphatase Gene Family AT2G46920 61.765 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1917 - - cam:101510249 803.512