Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1912 ATGATGAGTAACTTGTTTCTGCCTGTAGGGGGAGCATGTGGTTATGGAAACCTCTACACGGATGGTTATGGCATAAAAACAGCTGCGTTGAGTACTGCTTTGTTTAATGATGGCAAGGCATGCGGTGCCACAAATTTCTGTCCACCAAACTATGCACTCCCTAGTGACAATGGTGGTTGGTGCAACCCTCCTAGACCACACTTTGACATGTCTCAACCTGCGTTTGAGATGATCGCCAAGTACAAGGCTGGAATTGTTCCAATTTTCTACAGAAAAGTTGGGTGCAAAAGGACTGGAGGCATCAGATTTACAATTAATGGAAAAGACTACTTTGAACTAGTGCTTATAAGCAACGTGGGTGGAGTAGGAGAGATCTCCCGGGTTTGGATCAAAGGGTCCAAAATGAACAACTGGGAGACCATGTCAAGGAACTGGGGAGCTAACTGGCAAAGCTTAAGCTATCTCAATGGTCAGAGCTTGTCATTCAGAGTCCAACTCAGCAATGGAAAGACTGGCACAGCTTATAATGTGGCACCGCCCAATTGGAGTTTTGGCCAGTCTTTCAAAAGCAATATTCAGTTCTGA 585 0.4513 MMSNLFLPVGGACGYGNLYTDGYGIKTAALSTALFNDGKACGATNFCPPNYALPSDNGGWCNPPRPHFDMSQPAFEMIAKYKAGIVPIFYRKVGCKRTGGIRFTINGKDYFELVLISNVGGVGEISRVWIKGSKMNNWETMSRNWGANWQSLSYLNGQSLSFRVQLSNGKTGTAYNVAPPNWSFGQSFKSNIQF* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1912 194 Gene3D - 6 44 IPR036908 -
Dod06g1912 194 Gene3D - 45 93 IPR036908 -
Dod06g1912 194 PANTHER EXPANSIN-A15 9 43 IPR002963 GO:0009664
Dod06g1912 194 PANTHER EXPANSIN-A15 43 194 IPR002963 GO:0009664
Dod06g1912 194 SMART dpbb_1 27 90 IPR007112 -
Dod06g1912 194 Gene3D - 100 194 IPR036749 -
Dod06g1912 194 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 110 190 IPR007117 -
Dod06g1912 194 PANTHER EXPANSIN 9 43 - -
Dod06g1912 194 PANTHER EXPANSIN 43 194 - -
Dod06g1912 194 PRINTS Expansin signature 176 192 IPR002963 GO:0009664
Dod06g1912 194 PRINTS Expansin signature 22 36 IPR002963 GO:0009664
Dod06g1912 194 Pfam Expansin C-terminal domain 101 179 IPR007117 -
Dod06g1912 194 PRINTS Expansin/Lol pI family signature 9 27 IPR007118 GO:0005576
Dod06g1912 194 PRINTS Expansin/Lol pI family signature 176 190 IPR007118 GO:0005576
Dod06g1912 194 PRINTS Expansin/Lol pI family signature 138 152 IPR007118 GO:0005576
Dod06g1912 194 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 10 100 IPR007112 -
Dod06g1912 194 Pfam Lytic transglycolase 43 90 IPR009009 -
Dod06g1912 194 SUPERFAMILY Barwin-like endoglucanases 9 118 IPR036908 -
Dod06g1912 194 SUPERFAMILY PHL pollen allergen 97 190 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1912 Dod-Chr6 28025351 28026679 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1912 9 194 Expansin Gene Family AT4G01630 70.142 7.38e-106 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1912 - - gmx:100813434 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1912 06 28025351 28026679 Dod06g1912 06 28025351 28026679 ECH