Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1898 ATGGGGAGCCTCTTCTGGGTTGGCATTGTAACGGGGTTCGTTGTTTTTGGAAACTGGGTTAATGGCTCTGAATTTGAAGCCTCTCGGTCTCAATATATCAATGAAACGGAGCTGTCTTTGTTGGAGGCTCATGAAGCGTCCGCGTCCTTGGCTGGGAGGAGGCCTCTCATGGTAGGACTTACCCTTATTCATAGTGCTGCTGCTAAAGGAGCAGTTTGCTTGGATGGAACATTGCCTGGTTATCATTTGGATCGCGGATTTGGATCAGGAGCAAACAGCTGGCTCGTTAATTTAGAGGGAGGTGGATGGTGTAATGATGTTAGAACTTGTGTTTATCGCAAGAAATCACGGCGTGGATCATCAAAATTCATGGAAAAGGAGATACCTTTTACAGGAATAATGAGCAATAAGGCTGAAGAAAATCCAGGTTCCCATTCAGTTGAACTACCTGAATTGCTGAATTTATACTTTTCTTTTTATCTTCCTACAGGCTTAGCAGTTTGGTTTGTGTTGTTGTTCCTTGTGATCCTAGATTTTTTCAACTGGAACAGAGTTAAGATTCGTTATTGTGATGGTGCCTCTTTTGCCGGGGATGGTGAAGACAAGGCTGCTCAACTGCAATTTCGAGGACAGCGTATTTGGTTGGCTGCAATGGAGGATTTGATGTCAAACGGAATGCGTTTTGCCCAGAAGGCTCTTCTTTCTGGATGCTCAGCAGGTGGTCTGGCTACTATTATACACTGCGATGAATTTCGAGGTCTATTCCCAAGTACTGCCAAAGTGAAGTGTCTTAGTGATGCTGGGCTTTTTCTTGATGCGATTGATGTTTCTGGAGGGCATACCCTCAGGAATTTTTTCCACGGTGTTGTAGGGATGCAGGGAGTGCAGAAAAATCTGCCGCACACTTGTACCAATCATCTTGATCCCACTTCGTGCTTCTTCCCTCAGAACTTGATTGCCAGTATTAGAACCCCACTGTTCATTCTCAATACTGCCTATGATTCATGGCAGATCCAGTCAAGCTTAGCTCCTACAACGGCAGATCCCAGTGGCAATTGGCATGATTGTAGATTAAACCATGCTAGGTGTACTAGTTCACAGATCCAATTTCTGCAAGGATTCAGGAATCAACTGCTTAATGCTGTTAAAGGATTCTCAAGATCAAATCATAATGGGTTGTTCATAAATTCATGTTTTGCTCACTGCCAATCCGAGAGGCAGGATACATGGTTTGCTGACAATTCTCCGGTCATTAGGAACAAGGCAATTGCTCTGGCAGTTGGAGACTGGTATTTCGACCGAGCGGTTGCTAAGGACATTGATTGTGCTTACCCTTGTGACAATACATGCCACAACCTGATTTTCAGATGA 1371 0.4435 MGSLFWVGIVTGFVVFGNWVNGSEFEASRSQYINETELSLLEAHEASASLAGRRPLMVGLTLIHSAAAKGAVCLDGTLPGYHLDRGFGSGANSWLVNLEGGGWCNDVRTCVYRKKSRRGSSKFMEKEIPFTGIMSNKAEENPGSHSVELPELLNLYFSFYLPTGLAVWFVLLFLVILDFFNWNRVKIRYCDGASFAGDGEDKAAQLQFRGQRIWLAAMEDLMSNGMRFAQKALLSGCSAGGLATIIHCDEFRGLFPSTAKVKCLSDAGLFLDAIDVSGGHTLRNFFHGVVGMQGVQKNLPHTCTNHLDPTSCFFPQNLIASIRTPLFILNTAYDSWQIQSSLAPTTADPSGNWHDCRLNHARCTSSQIQFLQGFRNQLLNAVKGFSRSNHNGLFINSCFAHCQSERQDTWFADNSPVIRNKAIALAVGDWYFDRAVAKDIDCAYPCDNTCHNLIFR* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1898 456 PANTHER NOTUM-RELATED 4 144 IPR004963 GO:0016787
Dod06g1898 456 PANTHER NOTUM-RELATED 178 455 IPR004963 GO:0016787
Dod06g1898 456 PANTHER PECTIN ACETYLESTERASE 4 144 - -
Dod06g1898 456 PANTHER PECTIN ACETYLESTERASE 178 455 - -
Dod06g1898 456 Pfam Pectinacetylesterase 55 143 IPR004963 GO:0016787
Dod06g1898 456 Pfam Pectinacetylesterase 178 435 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1898 Dod-Chr6 27651142 27657072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1898 1 456 Carbohydrate Esterase AT1G57590 61.404 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1898 K19882 - gmx:100793403 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3257 01 73614544 73619909 Dod06g1898 06 27651142 27657072 PCT