Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1894 ATGCCTCTGTATGAGTTATACCGTTTGGCTAGAGAGAAGCTTGATAGAGAGAGTAACAGCACAGGTGCAGCTGATCAATCTTCCTCGCCTGAGAATGATTTTTTTGAGCTGGTTTGGGAAAATGGTCAGATTTCCACACAGGGTCAGTCCAGCAAAGTTAGGAAGAGTCCATCTTGCAGGAGTTTGCCATCTCACTGCTTACCATCTCACAGTCCCAAGGGTAGAGATAAAGATGTAGGGCATGCTACCAATTCAAGGGTGGGGAAGTTTGGGGATTTGGACACTGGATTGAATGAAATCGCAATGTCAGTGCCTTCTGCTGAAGTGGATTTGGGTCAAGATGAAGATGTTATCCCTTGGTTGGATTATACAATGGATGGCTCTTTGCGGCATGAATATGGTTCTGATTTCTTACATGATCTATCGGGGGTCACGGAGCATGACCTCCCTGCTTCAAATAATTTTTCTCTCATGGATAAAAGAAGTAATGGTAATCAGCTATTGAGGGAATCTAACAAGAATTCTGCAGAGCAAGGGCAAATTTTCAAGGGCTGCTTCAGCTGGAGAAGCTAA 573 0.4415 MPLYELYRLAREKLDRESNSTGAADQSSSPENDFFELVWENGQISTQGQSSKVRKSPSCRSLPSHCLPSHSPKGRDKDVGHATNSRVGKFGDLDTGLNEIAMSVPSAEVDLGQDEDVIPWLDYTMDGSLRHEYGSDFLHDLSGVTEHDLPASNNFSLMDKRSNGNQLLRESNKNSAEQGQIFKGCFSWRS* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1894 190 PANTHER TRANSCRIPTION FACTOR PIF3 1 176 IPR044273 GO:0003700|GO:0006355
Dod06g1894 190 MobiDBLite consensus disorder prediction 45 65 - -
Dod06g1894 190 PANTHER TRANSCRIPTION FACTOR PIF3 1 176 - -
Dod06g1894 190 MobiDBLite consensus disorder prediction 45 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1894 Dod-Chr6 27517948 27518638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1894 1 166 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 38.857 1.28e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1894 K12126 - gmx:100794974 268.855