Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1885 ATGATTATTGAGATTATTGTTATGTATCTCATCCAAGACCGGAAGTATTGTCCAGGAATTGATAACCTTCTTGTACTTCTTATTGGAGGAATTCCAATTGCCATGCCTACTGTTCTCTCAGTGACCATGGCCATTGGTTCTCATAGGCTATCTCAGCAGGGAGCTATCACAAAGATGATGACAGCTATTGAAGAGATGGCTGGTGTGGATGTGCTTTGTAGTGATAAAACTGGGACTCTAACCTTAAATAAGCTAACTGTTGACAAAAATCTTATTGAGGTTTTTGCAAAAGGAGTGGATCCAAATACTATTATTTTGATGGCAGCTCAAGCCTCAAGACTTGAGAATCAAGGTGCAATAGATTCTGCCATAGTTAAGATGCTGGATGATCCGAAGGAGCGACACCGGACTCTTCTTCTTTGTTGGACGAGGCAACGATGA 441 0.4104 MIIEIIVMYLIQDRKYCPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKMMTAIEEMAGVDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDPNTIILMAAQASRLENQGAIDSAIVKMLDDPKERHRTLLLCWTRQR* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1885 146 PANTHER PLASMA MEMBRANE ATPASE 1 135 - -
Dod06g1885 146 SUPERFAMILY Calcium ATPase, transmembrane domain M 3 68 IPR023298 -
Dod06g1885 146 Gene3D - 70 84 IPR023214 -
Dod06g1885 146 PANTHER CALCIUM-TRANSPORTING ATPASE 1 135 - -
Dod06g1885 146 ProSitePatterns E1-E2 ATPases phosphorylation site. 75 81 IPR018303 -
Dod06g1885 146 Gene3D - 85 135 IPR023299 GO:0000166
Dod06g1885 146 Gene3D - 1 69 - -
Dod06g1885 146 SUPERFAMILY HAD-like 61 85 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1885 Dod-Chr6 27280784 27287910 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1885 1 133 Primary Pumps ATPases AT5G62670 87.970 8.45e-73 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1885 K01535 - vvi:100241576 229.18