Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1880 ATGGCTATTTCACCCTTCTTTGGCCTTCCGGAATTCTCTCACTTGGGTTGGGGCCACTGGTTTACATTGAAGGATCTTGAACTAGCAACAAACCGTTTTGCAGAGGAGAATGTCATTGGCGAGGGTGGCTATGGAGTTGTTTATAGAGGACAGTTGATCAATGGGACACCAGCAGCAGTTGAGAAGATACTCAACAACATGATGTTAGTCTATGAGTATGTCAACAATGGAAACTTGGAGAAATGGCTTCCTGGAGCAATGCGTCATCAGGGGTATCTTACCTGGGAAGAGCGTATCAAGATTCTCCTGGGCACAGCTAAAGCGTCGGTCTCTGTGTCCAAGTTTCTTCAGGGTTTTGAAATCCTCATTTCAGGGTTTTCTTAG 384 0.4557 MAISPFFGLPEFSHLGWGHWFTLKDLELATNRFAEENVIGEGGYGVVYRGQLINGTPAAVEKILNNMMLVYEYVNNGNLEKWLPGAMRHQGYLTWEERIKILLGTAKASVSVSKFLQGFEILISGFS* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1880 127 Gene3D Phosphorylase Kinase; domain 1 10 66 - -
Dod06g1880 127 PANTHER OS01G0323000 PROTEIN 3 67 - -
Dod06g1880 127 Gene3D Transferase(Phosphotransferase) domain 1 67 109 - -
Dod06g1880 127 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 68 109 - -
Dod06g1880 127 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 67 - -
Dod06g1880 127 PANTHER OS01G0323000 PROTEIN 68 109 - -
Dod06g1880 127 SUPERFAMILY Protein kinase-like (PK-like) 17 108 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1880 Dod-Chr6 27204665 27205492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1880 21 108 Strubbelig Receptor Gene Family AT4G22130 36.800 5.00e-17 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1880 - - gmx:100787014 182.185