Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1879 ATGACTTCAATACCAAGGTTTCTGATTTTGGCCTGGCCAAGCTACTGGGTGCTGGGAAGAGCCATGTCACCGCACGAATACGTGGCTCTTGAATATGCGCATACTGGCCTTTTAAATGAAGAGAGCGATGTTTATAGTTTTGGTGTCTTGCTATTGGAAGCAATTACCGGAAGAGATCCAAATTGTTATGTTCTTACTTATTTCTACGTCACAACTTATTACTGCAAGTTCTTATCAAGAGTTTTTACTGTTGTTTACCATGAACTGCAATGCCCTCAGGTTAATCTGATTGACTGGCTGAAGATGATGGTTGGAAACAGGCAATCAGAAGAAGTGGTGGACCCGAACATCGAGGTGAGGCCACCAACCAGAGCTTTGAAACGAGCTCTCTTAACTGCTTTAAGATGTGTGGATCCAGATTCTGTCAAAAGACCCAAGATGGGCCAAGTCTTACGTATGCTTGAGTCAGAGGAATACCCTCTACAAAGAGAGGACCGAGGGCAGCGACGAAATTGTGGGACTAACTCAGAAATTGAATCCCAGAAAGGATTATTCTGA 558 0.4373 MTSIPRFLILAWPSYWVLGRAMSPHEYVALEYAHTGLLNEESDVYSFGVLLLEAITGRDPNCYVLTYFYVTTYYCKFLSRVFTVVYHELQCPQVNLIDWLKMMVGNRQSEEVVDPNIEVRPPTRALKRALLTALRCVDPDSVKRPKMGQVLRMLESEEYPLQREDRGQRRNCGTNSEIESQKGLF* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1879 185 Gene3D Transferase(Phosphotransferase) domain 1 14 177 - -
Dod06g1879 185 SUPERFAMILY Protein kinase-like (PK-like) 22 160 IPR011009 -
Dod06g1879 185 PANTHER OS01G0323000 PROTEIN 16 63 - -
Dod06g1879 185 PANTHER OS01G0323000 PROTEIN 16 63 - -
Dod06g1879 185 PANTHER OS01G0323000 PROTEIN 92 182 - -
Dod06g1879 185 MobiDBLite consensus disorder prediction 163 185 - -
Dod06g1879 185 Pfam Protein tyrosine and serine/threonine kinase 19 152 IPR001245 GO:0004672|GO:0006468
Dod06g1879 185 PANTHER OS01G0323000 PROTEIN 92 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1879 Dod-Chr6 27201398 27204070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1879 27 159 Receptor kinase-like Gene Family AT2G48010 36.842 3.17e-15 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Dod06g1879 PK_Tyr_Ser-Thr 2e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1879 - - gmx:100305384 193.356