Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1875 ATGGCATCGGTTGGTGTAGCACCAACTTCAGGCATGAGGGAAGCCAGTGGTCACGCAGCAGCAGGTGTTGATAGATTGCCAGAGGAGATGAACGATATGAAGATTAGAGATGATAGAGAAATGGAAGCCACAGTTGTTGATGGAAATGGAACAGAGGCAGGACATATCATTGTGACTACCATTGGGGGTAGAAATGGTCAGCCAAAGCAGACTATAAGCTATATGGCAGAGCGTGTTGTAGGGCACGGATCATTTGGAGTTGTCTTCCAGGCTAAATGCGTGGAAATGGGTGAAACTGTGGCTATCAAAAAGGTTCTTCAGGATAAGAGGTACAAGAACCGGGAGCTGCAAACAATGCGCCTTCTTGACCACCCGAATGTTGTCGCTTTGAAGCACTGTTTCTTTTCGACCACTGAAAAGGATGAACTGTACCTTAATTTGGTTCTCGAGTATGTTCCTGAGACAGTTCATCGCGTGATCAAACATTACAACAAGTTGAACCAAAGGATGCCATTGATATATGTGAAACTCTATACGTACCAGATCTTTAGGGCATTGTCTTATATTCATCGTTGTATTGGAGTTTGCCATCGGGATATCAAGCCTCAAAATCTACTGGTCAATCCTCACACCCACCAAGTTAAATTATGTGACTTTGGAAGTGCAAAAGTGCTGTTAGATGCCTTGATCCATCCTTTCTTTGATGAGCTTCGTGATCCAAACACTCGCTTGCCAAATGGCCGTTTCCTTCCACCACTTTTTAATTTCAAATCTCATGAACTGAAGGGAGTCCCTGTTGAGACCTTGGTGAAATTGGTTCCAGAGCATGCAAGGAAGCAATGCCCGTTTCTTGGCTTGTGA 861 0.4437 MASVGVAPTSGMREASGHAAAGVDRLPEEMNDMKIRDDREMEATVVDGNGTEAGHIIVTTIGGRNGQPKQTISYMAERVVGHGSFGVVFQAKCVEMGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVALKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYNKLNQRMPLIYVKLYTYQIFRALSYIHRCIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLLDALIHPFFDELRDPNTRLPNGRFLPPLFNFKSHELKGVPVETLVKLVPEHARKQCPFLGL* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1875 286 ProSitePatterns Protein kinases ATP-binding region signature. 80 104 IPR017441 GO:0005524
Dod06g1875 286 Gene3D Transferase(Phosphotransferase) domain 1 154 228 - -
Dod06g1875 286 Gene3D Phosphorylase Kinase; domain 1 58 153 - -
Dod06g1875 286 SMART serkin_6 74 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1875 286 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Dod06g1875 286 SUPERFAMILY Protein kinase-like (PK-like) 73 228 IPR011009 -
Dod06g1875 286 Pfam Protein kinase domain 74 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1875 286 ProSiteProfiles Protein kinase domain profile. 74 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1875 286 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 226 284 - -
Dod06g1875 286 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 1 226 - -
Dod06g1875 286 MobiDBLite consensus disorder prediction 1 29 - -
Dod06g1875 286 PANTHER SHAGGY-RELATED PROTEIN KINASE ALPHA 226 284 - -
Dod06g1875 286 PANTHER SHAGGY-RELATED PROTEIN KINASE ALPHA 1 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1875 Dod-Chr6 27083275 27086433 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1875 74 227 MAP Kinase Gene Family AT2G42880 35.625 4.04e-24 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Dod06g1875 Pkinase 2.4e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1875 K00924 - gmx:100780226 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3202 01 72921322 72925118 Dod06g1875 06 27083275 27086433 ECH
Dod06g1875 06 27083275 27086433 Dod06g1875 06 27083275 27086433 ECH