Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1868 ATGGTGAATATGGGCGTTGCTAACGGGAGTTCAGAGGCAACGATTGAGATCAAAGATCTCAGATTCACGTACCCTGGCATCGACGGCCACCCTCCGCCTGGTTCCACTCCTCTCATTCAGGACTTCTCTCTCACACTCCATTCGGGCGATCGATGCCTCTTCGTTGGATCCAATGGCGCTGGAAAGACCACCATCCTCAAGATATTAGGAGGGAAGCACATGGTGGATCCGGACATGGTTCGCGTGCTTGGGAGATCGGCTTTTCATGACACTACTTTGACATCTTCTGGTGATCTGTGTTATCTTGGTGGGGAGTGGAGGCGCGATGTTGCTTTTGCAGGTTATGATGTTCCAATACAAATGGATGTTTCTGCTGAAAAGATGATATTTGGTGTGGGAGGGATTGATCCTGAAAGAAGAGCAGAGCTAATCAAGGTATTAGACATCAATCTTTCCTGGAGATTGCACAAAGTATCTGATGGTCAAAGAAGAAGAGTGCAAATTTGTATGGGCCTCCTCAAACCATTCAAGGTTCTTCTTCTTGATGAGATAACAGTTGACCTTGATGTTCTAGCAAGAGCTGACCTCCTGAAGTTCCTAAGAAAGGAATGTGATGAGAGGGGTGCCACCATTATCTATGCAACACATATATTTGATGGTCTTGAGGACTGGCCAACTAACATTGTTTATGTATCCCATGGAAAGCTGCAACTAGCCATGCCTATGGACAAAGTCAAAGAAATTAGCAAACTGTCACTGATGAGAACAGTTGAAAGTTGGCTGAGAAAAGAGCGCGATGAAGAGAGAAGGAGAAGGAAAGAGAGGAAGGCAGCTGGTCTTCCTGAATTTGAAAAGCAAGTTGAGGGAAGCCGTGTGACAGGGGATCCGGCGCATGCTGCCATTCGAGTAACTAATAATGGCTGGGCAGCAGGACGATTACATTCCACCCTTGCTGGTGAGGAAAACTTTCTCTTTAGCTCAAACAGAGTATTGAGGCAGTAG 1002 0.4641 MVNMGVANGSSEATIEIKDLRFTYPGIDGHPPPGSTPLIQDFSLTLHSGDRCLFVGSNGAGKTTILKILGGKHMVDPDMVRVLGRSAFHDTTLTSSGDLCYLGGEWRRDVAFAGYDVPIQMDVSAEKMIFGVGGIDPERRAELIKVLDINLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLKFLRKECDERGATIIYATHIFDGLEDWPTNIVYVSHGKLQLAMPMDKVKEISKLSLMRTVESWLRKERDEERRRRKERKAAGLPEFEKQVEGSRVTGDPAHAAIRVTNNGWAAGRLHSTLAGEENFLFSSNRVLRQ* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1868 333 PANTHER ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED 12 332 - -
Dod06g1868 333 MobiDBLite consensus disorder prediction 264 282 - -
Dod06g1868 333 PANTHER ABC TRANSPORTER I FAMILY MEMBER 20 12 332 - -
Dod06g1868 333 SMART AAA_5 48 235 IPR003593 -
Dod06g1868 333 Gene3D - 10 292 IPR027417 -
Dod06g1868 333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 250 IPR027417 -
Dod06g1868 333 Pfam ABC transporter 40 185 IPR003439 GO:0005524
Dod06g1868 333 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 15 258 IPR003439 GO:0005524
Dod06g1868 333 MobiDBLite consensus disorder prediction 264 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1868 Dod-Chr6 26926042 26930290 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1868 15 212 Calmodulin-binding Proteins AT2G36910 23.256 3.74e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1868 K12608 - gmx:100782386 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1868 06 26926042 26930290 Dod06g1868 06 26926042 26930290 ECH