Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1858 ACCATGTCCGACTACAAAGGAACCAGAGACCAATACGGCGTGCTCCTCTACTACAAGTACGCCGACATCCCAAACCTCGACGACCTCGTCTCCTTCTACCACTCCAACTGCTCCTCCCTCTCCCTCCTCGGTCGCGTTCGCCTCTCTCCCCGCGGCGTCAATGTCACTGTTGGCGGCAGGTTGTCCTGTCTGGAGAGCCACATTGAAGCCCTCAAGGCCTATAACAGGTTGTTCGAAGGGACGGATTTCAAGCTCGCTACTTGTCATCAGCCACTCAACGACAAGGTCGCCAAGGAGTGTGGCTTCACTTCTCTCTCCATTCGCATCGTTGAGGAACTGGTTACTCTCAGCCCTCATCCCCTGTTAAAGTCACCGGAAATTTCAAATGCTGGGACACATCTTTCTGCTGTTGAGTTCCATTCTTCCCTTCAGAATGCTGATAAGGAGAGTCCAGAAAACAGCCTTGTTTTACTTGATGCAAGGAATCTGTATGAAACAAGAATTGGGAAATTCCATGCACCAAATGTTGAAACTTTGGATCCACAAGTTAGGCAGTATAGTGATTTGTCCTCATGGATAGATGATAATAGTGAGCAGTTGAAAGGAAAACATGTCCTCATGTATTGTACCGGTGGAATCAGGTGTGAAATGGCATCAGCATATATTAGGTCAAAAGGTGCTGGGTTTGAGAATGTGTTCCAGTTATATGGTGGTATACAACGGTATTTGGAGCAATTCCCAGATGGTGGTTATTTCAAGGGAAAGAATTTTGTTTTTGATCATCGGATTTCAGTTGGAAGTTCAGATGCTAATGTTATTGGTACCTGCCTTATTTGCCACTGTTTGTATGATGATTATTCTTCACGCTGCCGATGTACTTATTGCCGAATGCTTGTCCTGGTTTGTCATAATTGCAAGAATGAAGATGCAGTATATGTTTGTGAGCTATGCCAAAAACAGGGAAAGGCTATTAGGTCAATGCAGTTAATTGATAATGGCAAATCAAAATCTCCATTGCCAGGTGTTCAGTTCCAGACTTTATCTTCAGATGATATATTATTGGCTCAAATTCCTAGGGAAGATGGTAAGTGTGCAATTCCTAACATCCTAATAATTACTGTTTCAGATGTCAGGACCTCCAGAAAACTGAGAATCTTATGCTTGCACGGGTTTCGGCAGAATGCATCCAGTTTTAAGGGAAGAACAGCATCATTAGCCAAAAAACTCAAGAAAGTAGCTGAATTTATTTTCATAGATGCACCTCATGAGTTGCCGTTCATTTATCAAACTTCCATGTCGATTCCCCATGCGAGTTGTGTATCGTCTTTGTCGCCACCAAGTCCACCTCCACCTCTGGAGAATTGCAGGAAGAAATTTGCATGGTTTGTAGCACCCAATTTTGATGGAAGTAGTGGTGTTGATTGGAAGGTAGCAGATGGCCCATTTGATCCACTTCAATACCAGCAGCAAACCGATGGATATGATACTTCTGTATCACACTTGAAGAATGTGTTTTCCCAAGAAGGGCCATTTGATGGCATCTTGGGATTTTCACAGGGAGCAGCAATGGTTGCTTTGATCTCTGCACAAAAAGAAATGCTAAAAGGTGAAATGGACTTCAAATTTGTAATATTGTGCTCAGGCTTTGCACTCCATGTGAAGGAGATGGAATGTGGCCTTATCAAGTGCCCTTCTCTTCATATTTTTGGCAATGAACATGGTAAAGACAGGCAGATAACCAACCAAGCAAGCAAGGAACTTGCTTCTCTATATGACAGTTGTTCTGTGATAGTTGAACATGATTGTGGTCATATAATCCCTACGAGGTCCCCATATATTGATGAGATTAAGGGTTTCCTTGGGCGTTTTCTG 1872 0.4338 TMSDYKGTRDQYGVLLYYKYADIPNLDDLVSFYHSNCSSLSLLGRVRLSPRGVNVTVGGRLSCLESHIEALKAYNRLFEGTDFKLATCHQPLNDKVAKECGFTSLSIRIVEELVTLSPHPLLKSPEISNAGTHLSAVEFHSSLQNADKESPENSLVLLDARNLYETRIGKFHAPNVETLDPQVRQYSDLSSWIDDNSEQLKGKHVLMYCTGGIRCEMASAYIRSKGAGFENVFQLYGGIQRYLEQFPDGGYFKGKNFVFDHRISVGSSDANVIGTCLICHCLYDDYSSRCRCTYCRMLVLVCHNCKNEDAVYVCELCQKQGKAIRSMQLIDNGKSKSPLPGVQFQTLSSDDILLAQIPREDGKCAIPNILIITVSDVRTSRKLRILCLHGFRQNASSFKGRTASLAKKLKKVAEFIFIDAPHELPFIYQTSMSIPHASCVSSLSPPSPPPPLENCRKKFAWFVAPNFDGSSGVDWKVADGPFDPLQYQQQTDGYDTSVSHLKNVFSQEGPFDGILGFSQGAAMVALISAQKEMLKGEMDFKFVILCSGFALHVKEMECGLIKCPSLHIFGNEHGKDRQITNQASKELASLYDSCSVIVEHDCGHIIPTRSPYIDEIKGFLGRFL 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1858 624 Gene3D - 123 279 IPR036873 -
Dod06g1858 624 Gene3D - 2 114 - -
Dod06g1858 624 Pfam Rhodanase C-terminal 253 318 IPR022111 -
Dod06g1858 624 ProSiteProfiles Rhodanese domain profile. 151 251 IPR001763 -
Dod06g1858 624 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 7 623 - -
Dod06g1858 624 Pfam UPF0176 acylphosphatase like domain 13 112 IPR040503 -
Dod06g1858 624 SUPERFAMILY alpha/beta-Hydrolases 379 624 IPR029058 -
Dod06g1858 624 Pfam Serine hydrolase (FSH1) 381 615 IPR005645 -
Dod06g1858 624 Gene3D alpha/beta hydrolase 379 624 IPR029058 -
Dod06g1858 624 SMART rhod_4 141 248 IPR001763 -
Dod06g1858 624 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 7 623 IPR020936 -
Dod06g1858 624 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 125 265 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1858 Dod-Chr6 26744156 26749428 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1858 9 624 Sulfurtransferasese or Rhodanese AT1G09280 63.124 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1858 - - mtr:MTR_1g084180 1045.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1858 06 26744156 26749428 Dod06g1858 06 26744156 26749428 ECH