Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1855 ATGGCATCCCTAGAACCAAACGTTGATTCCAATAGCCCCGAAACGCTCCACGATGATGATTCCAACCACAAGAAGCGCCGCAAAATCGGAGACCACACCTCCTCAGACCACACCTCGCTCAATCTCGTCCCCTGGAGATCCCAATCGGAGCAGCAGATCTACTCCACCAAGCTCCTCCGCGCCCTCCGCCACGTCCTCCGCCGCAACCCTTCCCAGGCCGCCAAGCCTCGCCACGTCCGCCAGGCCGCCGACCGAGCCCTCGCCGCCGCCGCCAAGGGAAGAACGCGCTGGAGCCGCGCCATCCTCTCGGCGCCATCGCCGTCGATTCTCCGGCGAAATCACAAGAAGGTTAAGAAGCCCTCGTCCTCCGCCGCGGTGACCGGATTGAAGAGAGCGCGGAGCGGCGGAGAGAGACGGAGGTTACCGGCTGTGCAGAGGAAAGCGCGCGTTCTCAGCCGGTTGGTTCCCGGTTGCCGGAAGCTCTCGTTCCCGAACCTTCTAGAAGAAGCGACTGATTATATCTCCGCCTTGGAGATGCAAGTGCGCGCCATGACCGCTCTCGCCGAGTTGCTTTCCGGTGGCGCGACGAGTGCACTCGCCGGTGAATCGTTGAGTTGA 618 0.6246 MASLEPNVDSNSPETLHDDDSNHKKRRKIGDHTSSDHTSLNLVPWRSQSEQQIYSTKLLRALRHVLRRNPSQAAKPRHVRQAADRALAAAAKGRTRWSRAILSAPSPSILRRNHKKVKKPSSSAAVTGLKRARSGGERRRLPAVQRKARVLSRLVPGCRKLSFPNLLEEATDYISALEMQVRAMTALAELLSGGATSALAGESLS* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1855 205 CDD bHLH_AtIBH1_like 137 188 IPR044549 GO:0006355
Dod06g1855 205 MobiDBLite consensus disorder prediction 12 34 - -
Dod06g1855 205 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 128 177 IPR011598 GO:0046983
Dod06g1855 205 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 15 204 IPR044660 GO:0006355
Dod06g1855 205 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 130 194 IPR036638 GO:0046983
Dod06g1855 205 MobiDBLite consensus disorder prediction 1 43 - -
Dod06g1855 205 PANTHER TRANSCRIPTION FACTOR BHLH150 15 204 - -
Dod06g1855 205 MobiDBLite consensus disorder prediction 115 141 - -
Dod06g1855 205 Gene3D - 127 197 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1855 Dod-Chr6 26684342 26685271 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1855 40 187 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 47.879 1.96e-37 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1855 - - adu:107465172 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3297 01 74003016 74005396 Dod06g1855 06 26684342 26685271 PCT