Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1818 ATGGCGACGAGGAACCGCACTCTCCTCTTCAGAAAGCACCGAGACGCACTGAAGAGCGTTCGCGCTCCCTCCTCGTCTTCGGCGCCTTCTACCTCCTCCGCCGCCGCCGGTCCCGTCATCGAAATGGTCAGCACCTCGCTCCTCAACCCTAATCGCTCCTACGCTCCCCTTAGTACCGAGGATCCCGGCAATTCGAGTAAGGGTCTAAATCCAATTACCGTGGGGTTACCTCCAGCTTGGGTGGATGTATCCGAAGAAATATCAACAAATGTGCAACGTGCACGAACAAAAATGGCGGAGTTGGCCAAGGCTCATGCAAAGGCTTTAATGCCATCTTTTGGGGATGGTAAGGAAGAACAACGTGCTATTGAATCCCTAACACACGAGGTAACTGACTTGATAAAGAAATCAGAGAAGAGATTGCAGAGGCTTTCTGCTACAGGGCCTTCTGAGGATTCCAACGTGAGGAAAAATGTGCAGCGTTCTCTTGCTACTGACCTTCAGAACCTCTCTGTAGAGCTACGCAAGAAACAATCAACATATTTGAAGCGCCTAAGGCAGCAGAAAGAGGGTCAAGATGGGGTTGATCTAGAGATCAACATGAATGGCAGTAAATCCAAATTTGAAGATGATGACTTGGATAATATGATATTTAATGAGCATCAGATGGCCAAGCTGAAAAAAAGTGAAGCATTTACAGCAGAAAGAGAAAAAGAGATCCAACAGGTTGTGGAATCTGTAAATGAGCTTGCTCAAATTATGAAAGATTTATCAGTCCTAGTCATAGACCAGGGAACCATTGTTGACAGAATAGACTACAACATTCAGAATGTAGCTACTACAGTTGAGGATGGCCTTAAACAACTGCAGAAGGCAGAGAGAAGTCAGAAAAAGGGGGGCATGATAATGTGTGCTACGGTGCTTGTTATCATGTGCTTTGTTATGTTGGTTCTCTTAATCCTTAAGGAAATATTGTGA 978 0.4571 MATRNRTLLFRKHRDALKSVRAPSSSSAPSTSSAAAGPVIEMVSTSLLNPNRSYAPLSTEDPGNSSKGLNPITVGLPPAWVDVSEEISTNVQRARTKMAELAKAHAKALMPSFGDGKEEQRAIESLTHEVTDLIKKSEKRLQRLSATGPSEDSNVRKNVQRSLATDLQNLSVELRKKQSTYLKRLRQQKEGQDGVDLEINMNGSKSKFEDDDLDNMIFNEHQMAKLKKSEAFTAEREKEIQQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVEDGLKQLQKAERSQKKGGMIMCATVLVIMCFVMLVLLILKEIL* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1818 325 ProSitePatterns Syntaxin / epimorphin family signature. 236 275 IPR006012 GO:0005484|GO:0006886|GO:0016020
Dod06g1818 325 MobiDBLite consensus disorder prediction 16 37 - -
Dod06g1818 325 SMART SynN_4 71 186 IPR006011 GO:0016020
Dod06g1818 325 CDD SNARE_syntaxin16 234 291 - -
Dod06g1818 325 Pfam SNARE domain 266 318 IPR000727 -
Dod06g1818 325 SMART tSNARE_6 225 292 IPR000727 -
Dod06g1818 325 MobiDBLite consensus disorder prediction 20 37 - -
Dod06g1818 325 PANTHER TARGET SNARE COILED-COIL-LIKE DOMAIN-CONTAINING PROTEIN-RELATED 1 321 - -
Dod06g1818 325 SUPERFAMILY t-snare proteins 76 285 IPR010989 GO:0016020|GO:0016192
Dod06g1818 325 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 230 292 IPR000727 -
Dod06g1818 325 PANTHER SYNTAXIN 1 321 IPR045242 -
Dod06g1818 325 Gene3D - 77 284 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1818 1 325 SNARE and Associated Proteins AT5G26980 78.834 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1818 K08489 - gmx:100796741 560.066