Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1810 ATGGGGCATTTTTCATCTATGTTCAATGGTTTGGCAAAGTCATTTGCATTAAAGAAAGGGAGGAATTCTAGCAGATGTAGTGGAAGAGAAACTGCGGAAGCAATGGCAAAGGAGGCAAAAAAGAATGATTTCATACTTTGTAGCTCAGGCACTGTTGATGTTGATGGCTCTAACAACTTTGCCTCAGTTTTCTCCAAAAGAGGCAAGAAAGGAGTGAATCAAGATTGCTGCATAGTGTGGGAAGAATTTGGCTGCCAAGACGACATGATCTTCTGTGGGATTTTTGATGGGCACGGGCCATGGGGTCACTTTGTGGCCAAAAGAGTGAGAGAATCAATGCCACAATGTTTGCTGTGCAACTGGCAGGAGACACTTTCCCAAACTGCACTCGATCCAGATATTGACATAGACACAGATAAGAAGCAGCACCGGTTTCATAAATGGAAGCATTCCTACTTGAAGACTTGTGCCGCCATTGATCAAGAACTACATCAGAATCGCAAGATAGATTCATTTTTCAGTGGAACAACTGCCCTCTCAATTGTTAGACAGGGTGAACTCATTGTGATTGCAAATGTTGGTGACTCACGTGCTGTATTAGCTACAACATCAGATGATGGGAGTTTGGAAGCAGTTCAGCTGACAGTAGATTTCAAACCCGACTTGCCTCAGGAGGCAGAACGGATAGTGGAGTGCCAAGGGCGGGTTTTCTGCTTAGAAGACGAGCCTGGAGTGCACAGGGTTTGGTTACCAGATGAAGACTCTCCTGGGTTGGCCATGTCTCGGGCCTTTGGAGACTACTGTGTCAAAGAGTATGGCCTTATTTCAGTTCCTGAGGTAACGTTCAGGAATATAACCGCCAGAGACCACTTTGTTGTGCTAGCCACTGATGGGGTATGGGATGTGATCTCCAACCAAGAAGCGGTGGACATTGTATCTTCAACACCGGACAGAGCAAAGTCAGGTAGACGTTTGGTGGAGTGTGCAATGCATGCATGGAAACGCAAGAGACGGGGCATTGCAATGGATGACATTTCAGCTATTTGTCTCTTCTTAAACTCTTCCCCTTCACTCGATCAAGTTAATCAAGTTGCCGCCCTAAAATAG 1107 0.4562 MGHFSSMFNGLAKSFALKKGRNSSRCSGRETAEAMAKEAKKNDFILCSSGTVDVDGSNNFASVFSKRGKKGVNQDCCIVWEEFGCQDDMIFCGIFDGHGPWGHFVAKRVRESMPQCLLCNWQETLSQTALDPDIDIDTDKKQHRFHKWKHSYLKTCAAIDQELHQNRKIDSFFSGTTALSIVRQGELIVIANVGDSRAVLATTSDDGSLEAVQLTVDFKPDLPQEAERIVECQGRVFCLEDEPGVHRVWLPDEDSPGLAMSRAFGDYCVKEYGLISVPEVTFRNITARDHFVVLATDGVWDVISNQEAVDIVSSTPDRAKSGRRLVECAMHAWKRKRRGIAMDDISAICLFLNSSPSLDQVNQVAALK* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1810 368 SUPERFAMILY PP2C-like 59 354 IPR036457 -
Dod06g1810 368 CDD PP2Cc 59 352 IPR001932 -
Dod06g1810 368 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Dod06g1810 368 SMART PP2C_4 51 350 IPR001932 -
Dod06g1810 368 Gene3D - 48 355 IPR036457 -
Dod06g1810 368 PANTHER ALPHABET, ISOFORM E-RELATED 1 361 - -
Dod06g1810 368 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 361 - -
Dod06g1810 368 Pfam Protein phosphatase 2C 80 320 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1810 Dod-Chr6 25991098 25996670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1810 1 353 PP2C-type Phosphatase Gene Family AT3G05640 70.704 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1810 - - gmx:100808955 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3334 01 74457316 74461419 Dod06g1810 06 25991098 25996670 PCT
Dod05g0349 05 4475396 4475788 Dod06g1810 06 25991098 25996670 PCT