Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1807 ATGGCGTCGGAGCCGCTGATCCAAGCGGCAGAAGCGTTGACGCGATCACACTCATCATCCCGGCAATGCGGCGAACCAACTCCGTTGATTTTCGATGAATTGCCCAAAGCCACCATCGTGTCTGTGTCGCGACCAGAGACCGGAGAGATTAGCCCAATCCTTCTTTCTTATACCATTGAGTTGGACTACAAACAGTTCAAGTGGCGTCTGCGCAAGAGAGCAACACAAATTCTCTATTTACAGTTTGCTTTGCGGAAACGTGCACTAATTGAAGATCTACATGACAAGCAAGGGCAGGTAAGAGAATGGCTTCAAAGCTTAGGAATAGTAGACCACACGGTGATGGTGCATGATGATGAAGAACCTGATGATGGAGTGCATTTACATAATGAAGACAGTGTCAAAAACAGATATGTTCCATCTGTTGCCGCTCTGTCAATAATTCGTCCATCATTAGGAGGGCAACAGTCAGTCATAGATAGAGCAAAAGTCGCAATGCAGAATTATTTGAATCTGTTTTTAGAAAGCCTGGATATTGTGAATTCTCCGGAGGTCTGCAGGTTTTTGGAGGTCTCCAAGCTATCCTTTTTACAGGAGTATGGCCCAAAACTTAAAGAGGGATACGTAACAGTGAAGCATTTGTCAAATATTTCACGGGATTCAGATGTATCATGCTTTCCATGTGATTGGTTTCGTTGGTGTAACAACAACTGGAAGAAGGTATGGGCTGTTTTGAAACCAGGATTTTTGGCCCTGCTGGATGGTCCTTTCAACAACAAACCACTGGATATACTTGTTTTTGATGTCCTTCCATCCTCAAATGGAGATAAAGGGAACCAAATACAATTAGCTGATCCTATAAAGGGACGCAATCCTTTGCGATACACATTTAAGGTTACTGGTGGGAATAGGAGCATATGGTTGAGAACTACCAGCAGTGCTAAAGTTAAAGCTTGGGTAAATGAAATCAATGAAGCCGGTCTACGACCTTCAGAGGGCTGGTGTCGTCCTCATCGGTTTGGTTCATTTGCTCCTGTAAGAGGTTTGACTGAAGATGGGAGCCAAGCCCAATGGTTTGTAGATGGACAGGCAGCATTTGAAGCAATTGCTTCTTCAATTCAAGATGCAAAGTCAGAGATCTTCATTACAGGATGGTGGCTTTGCCCAGAGCTATATCTGAGACGTCCTTTTGATAGTTTTTCTAACTTTAGACTAGACTCATTACTAGAAGAAAAAGCTAAGCAAGGAGTTCAGATCTATGTGCTTCTCTACAAGGAGGTTTCTCTGGCTTTGAAAATCAACAGCTTGTACAGTATGAAAAGACTCCTCAACATTCATGAGAATGTAAGAGTATTGCGCTCTCCTGATCATTTAACTAGTGGTGTGTACTTATGGTCGCACCATGAGAAACTTGTAATTATTGATTACAAGATTTGCTATATTGGAGGATTAGATTTATGCTTTGGTCGATATGACACGCCTCAACATCAAGTGGGTGATTTCCCCTCTGTAATATGGCCTGGAAAGGACTATTACAACCCAAGAGAATCTGAACCAAATTCATGGGAAGACACCATGAGAGATGAATTGGATCGTGAGAAATATCCCCGAATGCCATGGCATGATGTCCATTGTGCTCTATGGGGACCTCCCTGTCGTGACATTGCTCGGCACTTTGTTCAACGTTGGAACCATGCAAAGAGAACTAAAGCTCCAAATGAGCATGCAATCCCACTACTTATGCCTCACCATCAGATGGTTATCCCTCATTACTTGGGAAAAAGCAAAGAGATAGACATTGATGGAAAGAAAGATGAAGACAGCAAGAAAGAAATTGAGAGGCAAGAATCATTTTCTTCAGAGTCTCCAGTGCAAGATATTCCACTGCTTTTACCTCAAGAATCTGGTGGACTGGTTACTTCAATTGGAGATCATACAAATTTTAGCGGAAAAATTCCATTATCATCCGAAAAGCCGGAACATGAAACATTAGTTTCAGACACCCAGATGAAAGGGTTTCCAGATGAAGTTGATTCTTTTAACATGGGTGCACAATATGTCGATGATGGCCTAGATGATTGGTGGGAAACACCAGAAGAAGGTACCAATGATAGCATTGCTTTGGAATATGGACAAGTTGGTCCATGTACTGCTTGTTGCTGTCAGGTAATCAGAAGTGTCAGCCAGTGGTCTGCTGGAACCAGTCAGCCTGAAGAAAGCATTCACACAGCATATTGTTCTCTTATTGAAAAAGCAAAGCATTTTATCTACATTGAGAATCAATTTTTCATATCAGGTCTAGCAAAGGATGACATAATACAGAACCGTATATTAGAAGCACTATACAGGCGTATTTTGCAAGCCCACAAAGAAGAGAATGACTTTAGAGTTATAGTGGTGATGCCCCTCTTACCTGGATTCCAGGGTGGTCTTGATGATGGCGGTGCTGCAACTGTGAGAGCCTTAACACACTGGCAGTATAGAACAATTTCTAGGGAAAAACATTCCATATTACACAAGCTTGAAGCTATCCTTGGTACTAAGGCACATGATTATATTTCTTTCTATGGTCTACGATCTCATGGTAGACTTCATGCGGATGGTCCTATGGCTACAAGTCAGGTATATGTGCACAGTAAACTGATGATAATAGATGACCGTGTAGCTCTAATTGGATCATCTAATATCAATGACAGGAGTTTGCTTGGATTAAGAGACTCTGAGATTGGAGTGCTTATAGAAGACAAAGAATATGTTGAATCATTGATGAATGGAAAGCCATGGAAGGCTGGGAAATTTTCCTATAGCCTCCGTTGCTCCCTATGGTCTGAGCACCTTGGTCTTCAAACGGGAGAGATCAGTAAAATCAGTGATCCAGTAGCAGATACAACCTACAAGGACTTGTGGTCAGCAACTGCGAAGGAAAATACTAGGATATACCATGAAGTCTTCGCTTGCATTCCAAATGATCAGATACACTCCAGAGCTGCACTTCGGCAAAGCATGGCTCACTGGAAGGAAAAAGTTGGCCACCCCACAATAGACTTGGGAATAGCCCCTGATAAGTTATTAAGCAATGGGAATGGAGAAGTCAAAGTAACGGATCCAATAGATAGGTTGAAATCTGTAAAGGGACATCTTGTCTCCTTTCCCTTGGAGTTCATGCGTGATGAAGATCTAAGACCAGCTTTTATTGAGAGTGAGTTTTATGTAGCTCCTCAAGTATATCACTAG 3234 0.4221 MASEPLIQAAEALTRSHSSSRQCGEPTPLIFDELPKATIVSVSRPETGEISPILLSYTIELDYKQFKWRLRKRATQILYLQFALRKRALIEDLHDKQGQVREWLQSLGIVDHTVMVHDDEEPDDGVHLHNEDSVKNRYVPSVAALSIIRPSLGGQQSVIDRAKVAMQNYLNLFLESLDIVNSPEVCRFLEVSKLSFLQEYGPKLKEGYVTVKHLSNISRDSDVSCFPCDWFRWCNNNWKKVWAVLKPGFLALLDGPFNNKPLDILVFDVLPSSNGDKGNQIQLADPIKGRNPLRYTFKVTGGNRSIWLRTTSSAKVKAWVNEINEAGLRPSEGWCRPHRFGSFAPVRGLTEDGSQAQWFVDGQAAFEAIASSIQDAKSEIFITGWWLCPELYLRRPFDSFSNFRLDSLLEEKAKQGVQIYVLLYKEVSLALKINSLYSMKRLLNIHENVRVLRSPDHLTSGVYLWSHHEKLVIIDYKICYIGGLDLCFGRYDTPQHQVGDFPSVIWPGKDYYNPRESEPNSWEDTMRDELDREKYPRMPWHDVHCALWGPPCRDIARHFVQRWNHAKRTKAPNEHAIPLLMPHHQMVIPHYLGKSKEIDIDGKKDEDSKKEIERQESFSSESPVQDIPLLLPQESGGLVTSIGDHTNFSGKIPLSSEKPEHETLVSDTQMKGFPDEVDSFNMGAQYVDDGLDDWWETPEEGTNDSIALEYGQVGPCTACCCQVIRSVSQWSAGTSQPEESIHTAYCSLIEKAKHFIYIENQFFISGLAKDDIIQNRILEALYRRILQAHKEENDFRVIVVMPLLPGFQGGLDDGGAATVRALTHWQYRTISREKHSILHKLEAILGTKAHDYISFYGLRSHGRLHADGPMATSQVYVHSKLMIIDDRVALIGSSNINDRSLLGLRDSEIGVLIEDKEYVESLMNGKPWKAGKFSYSLRCSLWSEHLGLQTGEISKISDPVADTTYKDLWSATAKENTRIYHEVFACIPNDQIHSRAALRQSMAHWKEKVGHPTIDLGIAPDKLLSNGNGEVKVTDPIDRLKSVKGHLVSFPLEFMRDEDLRPAFIESEFYVAPQVYH* 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1807 1077 PIRSF PLD_euk 589 1077 IPR016555 GO:0004630|GO:0006654|GO:0048017
Dod06g1807 1077 PIRSF PLD_euk 8 597 IPR016555 GO:0004630|GO:0006654|GO:0048017
Dod06g1807 1077 Gene3D Endonuclease Chain A 349 587 - -
Dod06g1807 1077 SMART PH_update 203 330 IPR001849 -
Dod06g1807 1077 Gene3D Endonuclease Chain A 699 937 - -
Dod06g1807 1077 ProSiteProfiles PH domain profile. 202 328 IPR001849 -
Dod06g1807 1077 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 463 490 IPR001736 GO:0003824
Dod06g1807 1077 SUPERFAMILY Phospholipase D/nuclease 712 923 - -
Dod06g1807 1077 SMART pld_4 873 900 IPR001736 GO:0003824
Dod06g1807 1077 SMART pld_4 463 490 IPR001736 GO:0003824
Dod06g1807 1077 PANTHER PHOSPHOLIPASE D 27 1074 IPR015679 -
Dod06g1807 1077 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 873 900 IPR001736 GO:0003824
Dod06g1807 1077 Pfam PLD-like domain 746 920 IPR025202 -
Dod06g1807 1077 PANTHER PHOSPHOLIPASE D ZETA 2 27 1074 - -
Dod06g1807 1077 CDD PH_PLD 180 326 - -
Dod06g1807 1077 Gene3D - 198 327 IPR011993 -
Dod06g1807 1077 SUPERFAMILY Phospholipase D/nuclease 317 583 - -
Dod06g1807 1077 SUPERFAMILY PH domain-like 232 331 - -
Dod06g1807 1077 CDD PLDc_vPLD1_2_yPLD_like_1 356 500 - -
Dod06g1807 1077 MobiDBLite consensus disorder prediction 597 617 - -
Dod06g1807 1077 CDD PLDc_vPLD1_2_yPLD_like_2 733 917 - -
Dod06g1807 1077 MobiDBLite consensus disorder prediction 597 627 - -
Dod06g1807 1077 Pfam Phospholipase D Active site motif 463 490 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1807 Dod-Chr6 25914013 25926191 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1807 30 1077 Phospholipase D Gene Family (Wang group) AT3G05630 65.501 0.0 1387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1807 K01115 - gmx:100796914 1871.67